Panicum virgatum (switchgrass): 120677434
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Entry
120677434 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120677434
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120677434
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120677434
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120677434
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120677434
NCBI-ProteinID:
XP_039814524
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Position
6N:45814911..45819098
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AA seq
606 aa
AA seq
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MGARDKEGVVVAVDHGTRLGHGVVSRQIVDRRSGSDRSSESTVSKDKILWNGEEMQEMES
EDAVKREHGHDVAITGKQGVVQLGKESGRVSDVEAMHHKAAAVHNNPNVSLKKEISADRS
SEQFRGDTSRERDAEAASSSTSHNASQPDAMVRAIKNQLRTAKTYIGLLPSRGRHAFVRD
LRRKMRDIQQALGDATSDKRLPKNVHGKIRAMELTLAKIKQVHDNCAAIIDKLLSTLHST
EDQVQAQKQKANYVAQIAAKAIPKRLYCLALRLTNEYYSSSTNKKQFPYEEKFEDPKLQH
YALFSDNVLAAAVVVNSTIINAKNPASHVFHIVTDKQNYAAMRMWFLANPIGETAVQVQN
IADFTWLNSSYSPVLKQLESHFMINYYFNTNQDKPGKNPKFQNPKYLSILNHLRFYLPEI
FPKLSRVLFLDDDIIVQKDLSYLWSIDLKGKVNGAVHTCGETFHRFDRYLNFSNPLIAKK
FDRRACGWAYGMNMFDLSEWRKQNITGVYHYWQNLNADRQLWKLGTLPAGLVTFWNHTFP
LDRSWHLLGLGYKPNVNQRDIERAAVIHYNGNRKPWLEIGLPVYRQFWSKYVNFNNVYLR
ECNINP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcccgcgacaaggagggcgtggttgttgcagtggatcatggcactcgattggga
catggtgtagttagtcggcaaattgttgatcggagaagtggttcagatagatcaagtgaa
tccacggtcagcaaggataagatactgtggaatggagaagagatgcaggagatggagtca
gaggatgcagttaagagagagcacggtcatgatgttgccattacaggcaaacagggtgtt
gtacagttgggaaaagagagtggccgtgtcagtgatgttgaagcaatgcatcacaaagct
gctgcagtgcacaacaatcctaatgtttcattgaaaaaggaaatttctgctgatagatca
tctgagcaatttagaggcgacacctcaagagagcgtgatgcagaggcagctagcagtagt
actagtcataatgcaagtcagccagatgctatggtacgtgccatcaagaaccaactaaga
acagcaaaaacatatattgggctcctaccttctagaggccgtcatgcttttgttagagat
ctccgaagaaagatgagggatatccaacaagcacttggtgatgcaacaagtgataagcgg
ttaccaaagaatgtccatggaaaaattagagcaatggagttgacattagcaaagatcaaa
caagtacatgataactgtgcagctattattgataagctactatcaacccttcattcaact
gaagatcaagttcaagctcaaaagcaaaaggctaactatgtagcacaaatagcagctaag
gctattccaaaaaggctctattgtcttgcactgcgtcttacaaatgagtattattcttcc
agcaccaacaaaaagcagtttccatatgaagaaaagtttgaagatccaaagctacagcac
tatgccttattctcagataatgtactggcagctgcagtggttgtgaactcaactattata
aatgctaagaatccagcaagccatgtcttccatatcgtgacggacaaacaaaattatgct
gcaatgagaatgtggtttttggcaaatcccattggagaaactgctgttcaggtccagaac
attgccgactttacatggctaaattcgagctacagtccagttctgaagcagctggagtct
catttcatgatcaactactacttcaataccaatcaggataagccgggtaaaaatccgaag
ttccagaatcccaagtacctgtccattctcaaccatctgaggttttatcttcctgagatc
ttcccgaagctgagcagggttttatttcttgatgatgatattattgtccagaaggattta
agttatctttggtctatagatctcaagggcaaagttaacggagctgtccatacctgtgga
gagactttccataggtttgataggtacctcaacttctcaaatcctctaatcgctaagaag
tttgatcgtcgtgcctgtggctgggcatatggcatgaacatgtttgatttgtctgaatgg
aggaagcagaatattactggtgtctaccactactggcagaatctgaacgcagacaggcaa
ttatggaaattaggaacacttcctgctggtcttgtcacattctggaaccacacattcccc
ctcgatcgctcatggcatctcttgggtctagggtacaagccgaacgtcaaccaaagggat
atcgagcgcgcggctgttatacactacaacgggaatcgaaaaccttggcttgagattgga
ctgccagtataccgccaattctggtccaagtatgtaaattttaataatgtttatctacga
gagtgcaacataaacccgtga
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