KEGG   Panicum virgatum (switchgrass): 120677575
Entry
120677575         CDS       T07260                                 
Name
(RefSeq) succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial-like isoform X1
  KO
K00235  succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00020  Citrate cycle (TCA cycle)
pvir00190  Oxidative phosphorylation
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01200  Carbon metabolism
Module
pvir_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pvir_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    120677575
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    120677575
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     120677575
SSDB
Motif
Pfam: Fer2_3 Ribosomal_S14 Fer4_17 Fer2 Fer4_8 RickCE_cat
Other DBs
NCBI-GeneID: 120677575
NCBI-ProteinID: XP_039814663
LinkDB
Position
6N:complement(2958340..2962500)
AA seq 349 aa
MAAAALLRRSPAARALLSPALSSRLVTSKHHSSSPAPPPPPKAPAAMKTFSIYRWDPDSP
STKPHLKDYQVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLA
CLTKISSASSASTVSPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDPPSQEGKEILQT
KADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRLPLWGTLIKPKPNMFM
HLQARGYHGVADKRNLLDHKRRLLAEKYELRGKLYKAVCRDPDLPLDMREEFRYKLSKLP
RNSSMTRLRNRCIFTGRPRAVYKKFRMSRIMFRTLANKGELTGVKKASW
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggccgccgccgccctcctccgccgctcgccggcggctcgcgcgctcctctcgccggcc
ctctcgtcccgcctcgtcacgtccaagcaccactcctcgtcccccgcgcctccgccgccg
ccgaaggcgcccgcggccatgaagaccttctcgatctaccggtgggacccggactcgcca
tcgacgaagccgcacctcaaggactaccaggtggacctctccgactgcgggccgatggtg
ctggacgcgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagc
tgccgcgagggcatctgcgggagctgcgccatgaacatcgacggcgacaacggcctcgcc
tgcctcaccaagatctcctccgcctcctcggcctccacggtctcgccgctgccccacatg
ttcgtcatcaaggacctcgtcgtcgacatgaccaacttctacaaccagtacaagagcgtc
gagccctggctcaagcgcaaggacccgccgtcgcaggagggcaaggagatcctgcagacc
aaggccgaccgcgccaagctcgacggcatgtacgagtgcatcctctgcgcctgctgctca
acctcgtgcccatcctactggtggaacccagaggagtacctcggcccggccgcgctgctg
cacgccaacaggcttccgctgtgggggacgcttatcaaaccaaaacccaacatgttcatg
caccttcaagctcgaggataccatggggtggcagacaagagaaacctgctggaccacaaa
cgtagattgcttgcagaaaaatatgagctaagaggaaagctgtataaggctgtctgtagg
gaccctgatcttccgttggatatgcgggaagagtttcgctataagttgtcaaagttgcca
agaaatagctcaatgacacgccttagaaaccgctgcattttcacaggccgccctcgcgct
gtctacaagaaattccgcatgtcccgtattatgttccgcacattggcgaacaagggtgaa
ctgacaggggtaaagaaagcatcttggtag

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