Panicum virgatum (switchgrass): 120677659
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Entry
120677659 CDS
T07260
Name
(RefSeq) probable protein NAP1
KO
K05750
NCK-associated protein 1
Organism
pvir
Panicum virgatum (switchgrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
120677659
NCBI-ProteinID:
XP_039814768
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All DBs
Position
6N:4253191..4265898
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AA seq
1357 aa
AA seq
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MAHVSFKNKEVDGGMSRWSEYLNVEEPTPSALASWRNMVADGPQSSSAGGHKHLQMEPVV
QLSKVAEGLLAKMYRLNSILDYPDPNTHTFSDAFWKAGVFPNFPKICITLSKKFPEHPNK
LQLERVDKFALDALNENAEGYMHNLEQWILLLLDLLAFREQALRLILDLSSTVITLLPHQ
NSLILHAFMDLFCSFVRVNLFSEKVPRKMILQVYNILHVMLKGGRDCEFYHRLVQFVDSY
DPPIKGLHEDLNFVSPRIGEVLEAVGPIIFLSTDTKKLRNEGFLSPFHPRYPDILTNSAH
PMRAQDLANVTSYREWVLLGYLVCPDELLRVTSIDVAMVVLKENLILPLFRDEYILLQEN
YQLYVLPKVLESKRMAKSGRTKQKEADLEYNVAKQVEKMLTEVHEQALVSCDAMHRERRI
LLKQEIGRMVLFFTDQPSLLAPNIQMVFSALSLAQCEVIWYFQHVGIASSKSTRGKTVDI
DATDPTIGFLLDGMGKLCCLVRKYIAAIKGYALSYLSSCAGRIRFLLGTPGMVALDLDAT
LKGLFQQVLHCLENIPKPQGESVPAISSDLTDLRKNWLSILMIVTSSRSSINIRHLEKAT
VSTGKEGLVSEGNAAYNWSRCVDELESQLSKHGSLKKLYFYHQHLTTVFRNTMFGPEGRP
QHCCAWLGAACSFPECASAIIPEEVNKIGRDSISYVESLIESIMGGLEGLINILDSEGGF
GSLEMQLSPEQAALCLNSTRAKGVSSLLTPGHESYPDNSSSIKMLEAAMQRLTSLCSVLN
DMEPICVLNHVFVLREYMRDCILGNFRRRFHSMIRTDNCIQRPSIIESLLRRHLGIIHLA
EQHISMDLTEGIREVLLAESFTGPFPNLQMFETPVGTQGGGSAVEMICNWYIENVVKDAS
RIGVAFDAIQNCFRSSQPIGGGCLAEAFTDKRELKALVRLFGGYGIDKMDKMLREHTSAL
LNCIDSALRSNRDALEGLAGSVNSGDRIERDANLKQIIDIETLADLCIQAGQAITFRRLL
VEAVGAVLEEKVPLIYSLLKGLALQLPDEVPDKNEIIRLRRVASSVGVGDKHDAEWVHAI
LAEAGAANDNSWILLPYLCAAFMVSNIWSGAVYDVNIGGFSNNLHCLARCVSAVVGGSEY
TRVEREQRINSLSNGHTDDLQEAELPSRVSAEASIKSAMQIYVKLSAGIVLDSWNDTSRA
YIVPKLIFLDQLCELSPYLPRSTLEVHIPYTILRSIYHQLYGASLMASEPMDQSPKQSPL
ISLAHASPSVRQNRPETTPRSHTFEPSYYSSSGSQHDDGYEADKRTGQLRSMRRSGPLDF
SASRKVKFVEGSSSGGSHGAGSLQRFAVSRSGPLSYK
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgtgtcgttcaaaaacaaagaagtggatggaggtatgtcccggtggtcggag
tacctgaatgttgaagaaccgactccttctgcattggcaagttggaggaacatggttgct
gatgggccacaaagttcttccgctggtggccacaaacaccttcagatggaaccggtggtt
cagctgtcaaaagtcgcggaggggttgctggccaagatgtaccgtctgaatagcatcctg
gactatccggatcccaacacgcacacattctcggatgcattttggaaagctggcgtcttt
ccaaatttcccgaaaatttgcatcacactgtcaaagaaatttcctgagcatccaaataag
ctgcagctggaaagggtagataagtttgctcttgatgctttaaacgagaatgctgaaggt
tacatgcacaatctagagcaatggatcctgttgcttcttgatttgctggcgtttcgtgaa
caagctttgcgacttattttggatttgagcagcacagtcataacattgctgccacatcag
aactctttaattcttcatgcttttatggatctgttctgttcatttgtccgagtcaatctt
ttctccgagaaggtaccaagaaagatgatcctccaggtttacaacatcttacatgttatg
ctaaaaggtggtcgtgattgtgagttttatcaccgattggttcaatttgtggactcttat
gatccacctatcaaagggttgcatgaagatcttaattttgtgagcccgcgaattggagag
gtcctagaagctgttggcccaattatcttcctttcaactgataccaaaaagttaagaaat
gaaggtttcctcagtccatttcatccacgttatcctgacatcctaacaaactctgctcat
cctatgagggcccaagacttggctaatgtcacatcataccgtgagtgggttcttctagga
tatcttgtttgtcctgatgaattacttcgggtgactagtatagatgttgccatggttgtt
ttgaaagagaatttaatactccctctgttcagagatgagtacatcttacttcaggaaaat
tatcaactttacgttcttccaaaagttctagaatcaaagagaatggccaaatctggacga
actaagcaaaaggaagctgatctggagtacaatgttgcaaagcaggttgagaaaatgtta
acggaagtgcatgagcaagcgctagtgtcatgtgatgctatgcatcgtgaaaggagaatt
cttctcaagcaggaaattggaaggatggttctgtttttcacagatcaacctagcctccta
gcacctaatattcagatggtcttttctgctctttcattggctcaatgcgaggtgatttgg
tacttccaacatgtgggaattgcatcatcaaaatctactcgagggaaaactgttgacatt
gatgcaacggacccaactattggtttcttgttagatggaatgggcaaactttgttgcctg
gtccgtaaatacatagcagcaataaaaggatatgcattatcatacttgtcatcttgtgct
gggagaatacggttcttacttggtactccaggaatggttgctcttgacctagatgcgaca
ctgaaaggcctttttcagcaagtcctccattgtctggagaacattccaaaacctcagggg
gaaagtgttcctgccatttcctctgacttgactgatttgcgtaagaactggctctccatt
ttgatgattgtaacatcttcaagatcctcgataaacattcggcacttggagaaggctact
gtgtctacggggaaggagggtttggtttcggaaggcaatgctgcgtataattggtcaaga
tgtgtggatgaacttgagagccaactttccaaacacggaagtcttaaaaaactctacttt
tatcatcagcatctaaccacagtcttcagaaatacaatgtttggtccagaaggccgccca
cagcattgttgtgcttggcttggagctgcttgcagttttccagaatgtgcatctgcaatt
attcctgaagaggttaacaaaattggcagagattctatctcatatgttgagtcccttatt
gagtctatcatgggtggattggaaggattgataaacattctagattcagaaggtggattt
ggctcattagagatgcagctttccccagagcaagcagctctttgcttgaatagtacaaga
gcaaaaggtgtttcaagcttgttaacgccaggacatgagagttatcctgataatagttca
tcaattaagatgctggaagctgctatgcagaggctgacaagtttatgttctgttctaaat
gatatggagcctatctgtgttctcaaccatgtttttgttctcagggagtacatgagagac
tgtatcctagggaatttcaggagaagatttcatagtatgattagaactgataactgcatt
cagcgaccatcaatcatagaatctcttctaagaagacatctgggcatcatccatctagca
gagcagcatattagtatggaccttactgaaggtatacgtgaagtgctactagcagagagt
tttactggtccatttcccaatttgcaaatgtttgaaacaccagtggggacacaaggaggg
ggatctgctgtcgagatgatatgcaattggtatattgagaatgttgtaaaggatgcttct
cgcattggagttgcttttgatgcaatacagaattgcttcaggagctcacaacctattggt
ggtggatgtttagctgaagcatttacagataaaagagaactcaaagcccttgttcgtctt
tttggtggctatggaatagataaaatggataagatgctaagggaacatacatctgcactg
ttaaattgtattgattcagcattgaggtcaaatcgtgatgccttggagggtttagctgga
agtgtaaattctggtgataggattgaaagagatgcaaatctgaagcagatcattgatatt
gagacattggctgacctctgtattcaagcagggcaggcgataactttccgtcgactgttg
gttgaggctgttggagcggtgcttgaagagaaagtacctctcatatattctctgctcaaa
ggattagccctgcagttgccagatgaggtacctgacaaaaatgagattattagattgaga
agggttgcgagcagtgttggtgttggtgacaaacacgatgccgagtgggtacacgctatt
ctggcagaagctggtgcagctaatgataattcttggatcttacttccatatctttgtgct
gcatttatggtgtccaatatttggagtggtgctgtttatgatgtcaatataggtggattc
agtaacaatttgcactgccttgcaaggtgcgtaagtgctgtggttgggggaagcgagtac
actagggttgaaagggagcagcgaataaattctctttcaaatgggcatacagatgacttg
caagaagctgaattaccaagccgtgtctcagcagaagcaagtattaaatctgctatgcag
atctatgtcaaattgtctgcagggatagtcctcgattcatggaatgacacaagcagggca
tacattgttccgaagctaatattcctggatcaactctgtgagctgtccccgtacctcccc
agaagcactttagaggttcacataccttacaccatcctccgctcaatttaccaccagcta
tatggagcatcactgatggcctcagaaccaatggatcagtccccaaagcagtcacctctg
atctctcttgcgcacgcctccccatctgtgaggcaaaatcgaccagagacaacacccagg
tcccacaccttcgagcctagctactacagttcgtcagggtcccagcatgacgacgggtat
gaggcagataagaggaccggacagctgcggagcatgaggcgctcgggaccgcttgacttc
agcgctagtaggaaggtgaagtttgttgagggctctagctctgggggcagccatggggct
ggctcgctgcagagattcgcagtgtcaagatctggccctctgtcttacaaatag
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