Panicum virgatum (switchgrass): 120677676
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Entry
120677676 CDS
T07260
Name
(RefSeq) U-box domain-containing protein 8-like
KO
K27970
U-box domain-containing protein 8 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120677676
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120677676
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
U-box type E3
120677676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
zf-RING_UBOX
zf-Nse
zf-C3HC4_2
Arm
zf-C3HC4_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
120677676
NCBI-ProteinID:
XP_039814785
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All DBs
Position
6N:complement(4411883..4413643)
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AA seq
355 aa
AA seq
DB search
MEAWPDDFRCPITLEVMTDPVILPSGHTFERRSIQRWLDGGHLTCPVTNLPLPPSPPLIP
NHALRRLIAAVAPSAVAAPVPSEGPAQGRQEAAAAEAVQSSSSVPALLRLAKSGAAGRRE
VLESGNAAVLLRHAAAGDEAAARALLLLTLDGDDARVGLVADGAVDALSAAVRRGGAVAA
LAATALTSLATVDVNKCSIGAHPSVIPELVGLLRCGGPRERREAATALYELCKLPENRRR
AVREGAAPTLADFAAVGSARAVEVLGLLAKCREGRQQLCKIPGIVSVLSGVAGSGNSRAI
EQALLVLNWICSESNELALEATKLGAFKLCETLVNDDNCKIAKNAVELARTLETA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaggcatggccggacgacttccggtgccccatcacgctggaggtcatgaccgacccc
gtcatcctcccctccggccacaccttcgagcgccgcagcatccagcgctggctcgacggg
gggcacctcacctgccccgtcaccaacctcccgctcccgccctccccgccgctcatcccc
aaccacgcgctgcgccgcctcatagccgccgtcgcgccttcagcggtggccgcccccgtc
ccctctgagggacctgcgcaggggaggcaagaagcggcggcggcggaggcggttcagtcc
tcgtcgtccgtgccggcgctgctgaggctggccaagtccggcgccgccggacggagggag
gtgctggagtccggcaacgcggcggtgctgctgcggcacgcggcggccggggacgaggcg
gcggcccgggcgctcctgctcctcaccctggacggcgacgacgcgcgcgtcgggctcgtg
gcggacggcgccgtcgacgcgctctccgccgcggtacgccgcggcggcgcggtcgccgcg
ctcgcggccacggcgctcaccagcctcgccaccgtcgacgtcaacaaatgcagcatcggg
gcgcacccctccgtcatcccggagctggtggggctcctccgctgcggcggcccgcgggag
cgccgcgaggcggccacggccctctacgagctctgcaagctgccggagaaccgccgccgc
gccgtgcgcgaaggcgcggcgcccacgctcgccgacttcgccgccgtcggctccgcccgc
gccgtcgaggtgctcggcctcctcgccaagtgccgcgaggggcgccagcagctgtgcaag
atccccggcatcgtgtccgtgctctcgggcgtcgccggaagcggcaactcccgggcaatc
gagcaggccctgctcgtcctcaactggatttgctcggagagcaacgaattggcattggaa
gcgacaaagctgggagctttcaagctctgtgagaccctggtgaacgacgacaactgcaag
atcgccaagaacgcggtcgaattggcccggacgctcgagacagcgtga
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