Panicum virgatum (switchgrass): 120677728
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Entry
120677728 CDS
T07260
Name
(RefSeq) zinc finger CCCH domain-containing protein 59-like
KO
K24939
CWF19-like protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120677728
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120677728
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf_CCCH_4
zf-CCCH
zf-CCCH_4
Torus
zf-CCCH_10
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
120677728
NCBI-ProteinID:
XP_039814842
LinkDB
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Position
2K:41857140..41861572
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AA seq
605 aa
AA seq
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MAATPPAPAPPRILLAGDAHGRLHQLFKRVKSVNQSTGPFHAMLCVGQLFSPEADAEGAP
GDVADYLVGRATVPIPTYFTGDYGPTAPRLLSKAAAGARGFAPGGIEICPNLFWLRGSNR
FTLHGLSVVYLSGKKGPGGPGCYSQDDVDALRALAEEPGIVDLFLTNEWPTGVVNGADTS
NMPNQVLDPHGYDPVVAELVAEIKPRYHIAGTKGVFYSREPYVNDSAAHVTRFIGLANVG
NKEKQKFIHAISPTPASTMSSADIHAKPPNSTLSPYAAPAQSVPIEEAPKRPADNTDAQY
WRYDVKRQRQGEAEGGRLCFKFTSSGSCPRGSKCNFRHDEEAVEHYQRNVCFDFLNKGKC
ERGPECKFAHSLSGDTSIRDSRPRRRVESRCWFCLSSPDVESHLVISIGEAYYCALAKGP
LVPNHVLMIPVEHCPSTLMMPSEAEVELGRYKNALVKYFEKQGKTTVFFEWVSQNSRHAN
LQAVPVPFPKADAVNKIFHLAAKKLGFEFSVVNPDGGAKVARESLISQSESKSNLFYVEL
PEGKILLHNIDSNEKFPAQFGREVLAGLLSMADRADWRNCKLSKEEEIQMVDDFKHGFRE
FDPAE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccccgccggccccggcgccgccgcgcatcctcctcgccggtgacgcccac
ggccgcctccaccagctcttcaagcgcgtcaaatcggtgaaccagtcgacggggccgttc
cacgcgatgctctgcgtggggcagctcttctcccccgaagctgacgccgagggggcgccg
ggggacgtcgcggactacctcgtggggcgcgccaccgtgcccatcccgacctacttcacc
ggcgactacggcccgacggcgccgcggctgctgtctaaggccgccgctggcgcgcgcggg
ttcgcaccgggcggcatcgagatatgccccaacctcttctggctcaggggcagcaaccgt
ttcaccctccatggtttgtcggtggtttatttgtcggggaagaagggaccaggagggcct
ggctgctacagccaggatgatgtcgatgccctgcgggctcttgcagaagagccagggata
gttgatctgttcttgactaacgaatggccaactggagtggtgaacggggctgacacttct
aatatgcctaatcaggttttggatcctcatgggtatgatcctgttgttgctgaattggtt
gccgagattaagccaagatatcatattgccggtaccaaaggtgtcttttattcaagggaa
ccctatgtcaatgattctgctgcacatgttacccgctttattggacttgctaatgttgga
aacaaagaaaagcagaaatttattcatgcgatttctcctactccagcgtctaccatgtcc
agtgctgatatccatgccaagcctccaaattctacgttatcaccttatgctgctccagca
caatcagtccctattgaagaagctccaaaacgtccagctgacaacactgatgcgcaatat
tggcgttatgatgtcaagcggcaaaggcaaggggaagctgaggggggtagattatgtttc
aaatttacatcctcggggtcctgtccacgagggagtaaatgcaactttaggcatgatgag
gaggcagtggagcattaccagagaaatgtctgttttgattttctaaacaaaggaaaatgc
gagaggggcccggagtgtaagtttgctcacagcctatcaggggacacttctataagagat
tcaagacctcgcaggcgtgtggagagccgttgctggttctgcttgtcgagtccagatgtt
gagtcacatcttgttattagtatcggagaagcttactactgcgcccttgcaaaggggcca
cttgttccaaatcatgttctgatgatacctgttgaacactgccccagcacattaatgatg
ccctcagaagcagaggtagaacttgggaggtataaaaatgctctggttaagtactttgag
aagcaaggaaagacaacagtattctttgagtgggtttcacagaactcccgccatgcaaac
cttcaggccgttccagtaccgtttcctaaagcagatgcagttaataagatatttcatcta
gcagcaaaaaaactgggatttgaattctctgtggtgaatccagatggtggtgcaaaagta
gctagagaatctttgatatctcagtctgaaagcaaatcaaacctgttttatgttgagctc
ccggaaggcaaaatactcttgcataacattgacagtaatgagaagttccctgcccagttt
ggacgtgaggttttagcgggattgctaagcatggcggatcgtgcagattggagaaactgc
aagctttcgaaggaagaagagattcagatggtggatgatttcaaacatggtttccgtgaa
tttgatcccgctgagtga
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