Panicum virgatum (switchgrass): 120677731
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Entry
120677731 CDS
T07260
Name
(RefSeq) ribonuclease 1-like
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120677731
Enzymes [BR:
pvir01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
120677731
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
120677731
Prokaryotic type
120677731
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GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
120677731
NCBI-ProteinID:
XP_039814845
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All DBs
Position
6N:complement(40008049..40009630)
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AA seq
225 aa
AA seq
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MAARLPLAILLALAVAGRAAAQDYDFFYLVLQWPGSYCDTKQSCCYPSSGKPAADFGIHG
LWPNRDDGSYPQNCNPDAAFNPSKVSDLLSSLRAKWPTLACPTNDGLRFWGHEWEKHGTC
AADVFDEHGYFQAALRLRDQLGVLAALTAAGVNPDGGYYTLDQIKGAIRQGTGFEPYVEC
NRDEAGNSQLYQLYFCVSAAGDSFVDCPVLPRGRPCGSRIEFPAF
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcctgcccctggcgatcctgctggccctggccgtcgccgggcgcgcggcg
gcgcaggactacgacttcttctacctcgtgctgcagtggcccgggtcctactgcgacacc
aagcagagctgctgctacccctcgtccggcaagccggcggcggacttcggcatccacggc
ctctggcccaaccgcgacgacggctcctacccgcagaactgcaaccccgacgccgccttc
aacccgtccaaggtgagcgacctgctgagcagcctgcgcgccaagtggccgacgctggcg
tgcccgaccaacgacgggctccgcttctggggccacgagtgggagaagcacggcacctgc
gccgccgacgtcttcgacgagcacggctacttccaggcggcgctccgcctccgcgaccag
ctcggcgtcctcgccgcgctcaccgccgccggcgtcaaccccgacggcggctactacacg
ctggaccagatcaagggcgccatccggcagggcaccgggttcgagccctacgtggagtgc
aaccgcgacgaggccggcaacagccagctctaccagctctacttctgcgtgagcgccgcc
ggcgacagcttcgtcgactgccccgtcctcccccgcggccggccctgcggcagcaggatc
gagttcccggcgttctag
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