KEGG   Panicum virgatum (switchgrass): 120677819
Entry
120677819         CDS       T07260                                 
Name
(RefSeq) autophagy-related protein 8C
  KO
K08341  GABA(A) receptor-associated protein
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    120677819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120677819
   04121 Ubiquitin system [BR:pvir04121]
    120677819
   03029 Mitochondrial biogenesis [BR:pvir03029]
    120677819
Membrane trafficking [BR:pvir04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    120677819
Ubiquitin system [BR:pvir04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   120677819
Mitochondrial biogenesis [BR:pvir03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    120677819
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 120677819
NCBI-ProteinID: XP_039814958
LinkDB
Position
6N:10570397..10573065
AA seq 119 aa
MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLF
NT seq 360 nt   +upstreamnt  +downstreamnt
atggcgcggagctcgttcaagctggagcacccgctagagaggaggcaggctgaggccaac
cgcatcagggagaagtaccccgatagaatccctgtcattgttgagaaggctgagagaagc
gatatcccagacattgacaagaaaaagtaccttgttcctgccgacctcacagttggacag
tttgtctatgtggtacggaagcggatcaagctcagtgccgagaaggcgatcttcatcttc
gtaaagaacaccctcccgccaacagccgctctgatgtccgccatctacgaggagaacaag
gatgaggatggctttctctacatgacctacagcggcgagaacaccttcgggctgttctaa

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