Panicum virgatum (switchgrass): 120677862
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Entry
120677862 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120677862
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120677862
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Gene cluster
GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
MATH
MOR2-PAG1_N
Motif
Other DBs
NCBI-GeneID:
120677862
NCBI-ProteinID:
XP_039814999
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Position
6N:complement(7017103..7018218)
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AA seq
371 aa
AA seq
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MSSSPASWDCDGSGSASTTFAVKETGWHVFQAEYSEFNGIGAMRHIKSSTFFVGGHSWLI
TFFPDGLSEDVNKDWICFGLHLEKRGATGSGVGGREVTVLAKFSLLDEAGDPSYTKADKF
TFARTFESLALQRFIRRKEFESSYVRDGRFSVRCDLSVVEKVCTEVLVPPPELHRHLADL
LASGIGSDVTLEVGEEEFKAHKSMLAARSPVFKVEFFGGPLMENTGDRAKIDDMEPRVFK
ALLGFIYTDSLPEIEPTERVVMAQHLLVAADKYDIQRLKSICEYILCTYLNASVAATTLV
LAEQHRCHRLKEACLRILKSPDNKVALGCDDCQYLLGIFPSLLKELHETAQNTPHCPFVT
SAGDGPGAGPW
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctctccggcgtcgtgggactgcgacggcagcggcagcgcgtcgaccaccttc
gccgtgaaggagaccgggtggcatgtcttccaggccgagtactctgagttcaatggcatc
ggcgccatgaggcacatcaaatcgagcaccttcttcgtcggagggcacagctggcttatc
acgttcttccccgacggtttgagcgaggatgtcaacaaggactggatatgcttcggcctc
caccttgaaaagcgtggtgcgaccggcagcggcgtcggcggccgcgaggtcacggtactg
gccaagttcagcttgcttgatgaggccggagatccatcttacacgaaagctgacaagttc
accttcgcaagaacatttgaatccttggcgctccagcggttcattcggaggaaggaattc
gagtcatcctatgtaagagacggcaggttcagcgtaaggtgtgatctctcggtggtcgag
aaggtgtgcaccgaggtgttggtgccgccgccggagctgcaccggcatctcgccgacctc
ctcgccagcggcattgggtcggacgtgacgttagaggtcggcgaggaggagttcaaggcg
cataagagcatgctcgccgcgcggtcgccggtgttcaaggtggaattcttcggcggcccg
ttgatggagaacaccggcgatcgtgccaagatcgacgacatggagccgagggtgttcaag
gccttgctgggcttcatctacaccgactcgttgccggagattgagcccacggaaagggta
gtgatggctcagcatctgcttgttgcggcggacaagtacgacattcagaggctcaaatcg
atctgcgagtacattctctgcacctacctcaacgcaagtgtagcggcgactacgcttgtg
cttgctgagcagcatcgatgccatcggctcaaggaggcatgcttaaggatactcaagtcc
ccggacaataaggtggctctggggtgcgatgactgccagtatttgttaggcattttcccc
tctcttctcaaggaactgcatgagactgcccaaaatacccctcactgccctttcgtgacc
tcagcaggagatgggcccggagcggggccatggtag
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