Panicum virgatum (switchgrass): 120677974
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Entry
120677974 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120677974
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120677974
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120677974
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GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
CBX7_C
Motif
Other DBs
NCBI-GeneID:
120677974
NCBI-ProteinID:
XP_039815084
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Position
6N:complement(16433961..16435636)
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AA seq
387 aa
AA seq
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MAGNQTIKRIFEVPVFNAADSTLRIWPCFHRSPVFTAGGYEWSISYYPKSIYDRDSIDLC
LQLESEGAGVTISSSLALLDPMPSQPLSTLVEESPLMELDQAITSRSTVTHWVPKSKLSA
LVGDQDSLIFMWAITFLTQTPMPVPHTVPELELMPLPLPLPEPEPEPKMAAMPEVPAEDV
AAPSPVPATWTMTDVAPAGKVSVTDVTYSVAGGEIFHAHKVILATRSPVFEAELLGGPTS
TAEASQALAAAIEVDDMRPDVFKTLLHYIYTDTLPAMKGEAGDDEEARSQMTRHLLVAAD
WYGLEGLKLLCEGELAKTLGEGNMAEMLAFADDQYCSTLKDACVGFMVASPERMERVVAS
YGYQQLCLRHPLILVDVLEKSLMFRKA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaaccagacgatcaagaggattttcgaggtccctgtgttcaatgctgccgac
agcacccttcgcatatggccctgcttccaccggtcgccggtcttcaccgccggcgggtac
gagtggtcgattagctactaccccaaaagcatctacgaccgcgacagcattgacctctgc
ctgcagctggagtctgagggcgccggggtgacgatatcgtccagcctcgccctcctcgac
cccatgcctagccagccgctgtccacgctggtggaggaatcgccgctgatggagctcgat
caggccatcacaagtaggagcacggtcacccactgggtgccaaagagcaagctgagcgcc
ctagtgggtgaccaagacagccttatattcatgtgggccatcactttcctaacacagacg
ccaatgccggtgccgcacacggtgccagagctggagctgatgccgctaccgctgccgctg
ccggagccagagccggagccgaagatggcggcgatgcccgaggtcccagcggaagacgtg
gcggcgccgtccccagtcccagcgacatggacaatgacagatgtggcgccggcaggcaag
gtctcggtgacagacgtgacatactcggtcgcagggggagagattttccacgcccacaag
gttatactcgccacgcggtcgccggttttcgaggcggagctgctcggggggccgacgtcg
acggcggaggcgagccaagctctggcggcggccatcgaggtcgatgacatgaggcctgat
gtgttcaagacccttctgcactatatctacacggacaccctgccggcaatgaagggagaa
gccggtgatgatgaggaggcgaggagccagatgacgcgccacctgcttgtcgctgcggac
tggtacggcctggaggggctaaagctcctgtgcgagggggagctcgccaagaccctcggc
gagggtaacatggcggagatgctggccttcgcggatgatcagtactgcagcacgcttaag
gacgcctgcgtcgggttcatggtggcctcgccggagaggatggagagggtggtggcgagc
tacggataccagcaactctgcttgagacaccccctgattttggtagatgtgctcgagaag
tcgctcatgtttcgcaaagcgtag
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