Panicum virgatum (switchgrass): 120678003
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Entry
120678003 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120678003
KO
K14649
transcription initiation factor TFIID subunit 8
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120678003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120678003
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120678003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
120678003
NCBI-ProteinID:
XP_039815103
LinkDB
All DBs
Position
6N:complement(19538816..19539378)
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AA seq
170 aa
AA seq
DB search
GGASPIPRRLQAVVSTSQILRASGYSAVKAATLRALSDIAGHYIESLGRATTAFAGVPGR
IEPNIADIILALEDHALGGFPGVSDPAQPVFCSGALAELAGFVDAVEVPFAKPLPRRNPC
SGTGKGWESFASADREPPLSHVPAFRSGLPRIPVGKTDNWSTNLTPLAQI
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
ggtggggcctcgcccatcccccgccgcctccaggccgtggtctccacctcccagatcctc
cgcgcctccggctactccgccgtgaaggccgccacgctccgcgccctctctgacattgcc
ggccactacattgagtccctgggccgtgccaccacggccttcgccggggtccccggccgc
atagagccaaacattgctgacatcatcctcgcgctcgaggaccatgcgctcggcggcttc
cccggcgtgtccgaccccgcgcagcccgtgttctgctccggcgcgctcgcggagctcgcg
gggttcgtcgacgctgtggaggtgccgttcgcgaagcccctgccgaggaggaatccttgc
tccggcaccggcaaggggtgggagagcttcgcgtctgcggacagggagccgccgctgagc
cacgttccggcgttccgcagtgggctgccccgcatccccgtgggcaaaacagacaattgg
tctaccaatttaaccccgttagcccagatatag
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