Panicum virgatum (switchgrass): 120678051
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Entry
120678051 CDS
T07260
Name
(RefSeq) cellulose synthase-like protein D3
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120678051
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120678051
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
Motif
Other DBs
NCBI-GeneID:
120678051
NCBI-ProteinID:
XP_039815146
LinkDB
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Position
6N:30743913..30747456
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AA seq
1137 aa
AA seq
DB search
MSNPPPKKAAIRNPGPAAGGSRGPQAPGNTVKFARRTPSGRYVSLSREDIDMEGELGADY
ANYTVHIPPTPDNQPMMDGAEPASVAMKAEEQYVSSSLFTGGFNSVTRAHLMDKVIESDV
SHPQMPGSKASRCGMPGCDGKVMRTERGEEVYPCECRFRICRDCYLDAQKDGCLCPGCKE
HYKIGEYAEDDDPGDVKHYLPGPGGMNTSKSLLARNQNGEFDHNRWLFESSGTYGYGNAY
WPKGGMYDDDLDDEGGGGGDLPEQKPFKPLTRKQPMPTSIISPYRIFIVLRMFVLLFYLT
WRIRNPNMEALWLWGMSIVCELWFAFSWLLDMLPKVNPVNRSTDLSVLKEKFETPSPSNP
HGRSDLPGLDVFVSTADPEKEPVLTTATTILSILAADYPVEKLACYVSDDGGALLTFEAM
AEAASFANIWVPFCKKHDIEPRQPDSYFGLKGDPTKGKRRSDFVKDRRRVKREFDEFKVR
INGLPDSIRRRSDAFNAREDMKMLKHLRESGADPAEQPKVKKATWMADGTHWPGTWAAAA
PDHAKGNHAGILQVMLKPPSPDPLYGMPDEEQLIDLSDVDIRLPMLVYMSREKRPGYDHN
KKAGAMNALVRCSAVMSNGPFILNFDCDHYINNAQAIREAMCFVMDRGGERIAYIQFPQR
FEGIDPSDRYANNNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGFDPPRATEYTGWL
FRKKKKKEEAAADPETDTQSLKAAAEDFDAELSSMLVPRRFGNSSALMASIPVAEFQARP
LADHPAVRHGRPPGALTVPRPPLDPPTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDV
VSGYRMHNRGWRSVYCIPKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASR
RLMFLQRVAYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQTLNVAFLCYLLTITVTLI
ALGVLEVKWSGIALEDWWRNEQFWLISGTSAHLYAVVQGLLKVMAGIEISFTLTAKAAAD
DNEDIYADLYVVKWSSLLIPPITIGMINIIAIAFAFARTVYSDNPRWGKFIGGGFFSFWV
LAHLYPFAKGLMGRRGKTPTIVFVWSGLISITISLLWVAISPPEASAGGRAAGFQFP
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccgccgccgaagaaggcggcgatccggaaccccgggccggcggcgggcggc
tctcggggcccgcaggcgccggggaacacggtgaagttcgcgcggcggaccccaagcggg
cggtacgtgagcctgtcgagggaggacatcgacatggagggcgagctcggcgcggactac
gccaactacacggtgcacatcccgccgacgcccgacaaccagccgatgatggacggcgcc
gagccggcgtccgtggccatgaaggccgaggagcagtacgtctccagctcgctcttcacc
ggcggcttcaacagcgtcacgcgcgcccacctgatggacaaggtcatcgagtccgacgtc
agccacccacagatgcccggctccaaggcctcccgctgcggcatgcccggctgcgacggc
aaggttatgcgcacggagcgcggcgaggaggtgtacccctgcgagtgccgcttcaggatc
tgccgcgactgctacctggacgcgcagaaggacggctgcctctgcccgggctgcaaggag
cactacaagatcggcgagtacgccgaggacgacgaccccggcgacgtcaagcactacctg
ccggggccgggcggcatgaacaccagcaagtccctgctggcgcggaaccagaacggcgag
ttcgaccacaaccggtggctcttcgagagctcggggacctacggctacggcaacgcgtac
tggcccaagggcggcatgtacgacgacgacctggacgacgagggcggcggcggcggcgac
ctccccgagcagaagcccttcaagccgctgacgcgcaagcagcccatgccgacgtccatc
atcagcccgtaccggatcttcatcgtgctccggatgttcgtgctcctcttctacctgacg
tggcgcatccggaaccccaacatggaggcgctgtggctgtggggcatgtccatcgtgtgc
gagctctggttcgccttctcctggctgctggacatgctccccaaggtgaaccccgtgaac
cggagcacggacctgagcgtgctcaaggagaagttcgagacgccgtcgccgtccaacccg
cacggccggtccgacctgccggggctggacgtgttcgtgtcgacggccgacccggagaag
gagccggtgctgaccacggccaccaccatcctgtccatcctggcggcggactacccggtg
gagaagctggcgtgctacgtgtccgacgacggcggcgcgctgctcaccttcgaggccatg
gcggaggccgcgagcttcgccaacatctgggtgcccttctgcaagaagcacgacatcgag
ccccgccagccggacagctacttcggcctcaagggcgacccgaccaagggcaagcggcgg
tcggacttcgtcaaggaccggcgcagggtgaagcgggagttcgacgagttcaaggtgcgc
atcaacggcctcccggactccatccgccggcgctccgacgcgttcaacgcccgcgaggac
atgaagatgctcaagcacctccgcgagagcggcgccgacccggcggagcagcccaaggtg
aagaaggcgacgtggatggccgacggcacgcactggccgggcacctgggcggcggcggcg
cccgaccacgccaagggcaaccacgccggcatcctgcaggtgatgctgaagccgccgtcg
ccggaccccctgtacgggatgcccgacgaggagcagctcatcgacttgagcgacgtggac
atccgcctgccgatgctggtgtacatgtcccgcgagaagcgccccggctacgaccacaac
aagaaggccggcgccatgaacgccctggtgcgctgctccgccgtcatgtccaacgggccc
ttcatcctcaacttcgactgcgaccactacatcaacaacgcgcaggccatccgcgaggcc
atgtgcttcgtcatggaccgcggcggtgagcgcatcgcctacatccagttcccgcagcgc
ttcgagggcattgacccctcggaccgctacgccaacaacaacaccgtcttcttcgacggc
aacatgcgcgccctggacggcctccagggccccatgtacgtcggcaccggctgcatgttc
cgccgcttcgcgctctacggcttcgacccgccgcgcgccaccgagtacaccggctggctc
ttccggaagaagaagaagaaggaggaggcggcggcggacccggagacggacacgcagtcg
ctcaaggccgccgccgaggacttcgacgcggagctgtcgtcgatgctggtgccccggcgg
ttcggcaactcgtcggcgctcatggcgtccatcccggtggccgagttccaggcgcggccg
ctggcggaccacccggccgtgcggcacgggcggccccccggcgccctcaccgtgccccgg
ccgccgctggacccgccgacggtggcggaggccgtgtccgtcatctcgtgctggtacgag
gacaagacggagtggggcgaccgggtggggtggatctacggctccgtcaccgaggacgtg
gtgagcggctaccgcatgcacaaccgcgggtggcgctccgtctactgcatccccaagcgc
gacgcgttcctgggcacggcgcccatcaacctgacggaccgcctccaccaggtgctgcgc
tgggccaccggctccgtggagatcttcttctcccggaacaacgccttcctggcgtcgcgg
cggctcatgttcctgcagcgggtggcctacctcaacgtcggcatctaccccttcacctcc
atcttcctgctcgtctactgcttcatcccggcgctctccctcttctcgggcttcttcatc
gtgcagacgctcaacgtcgccttcctctgctacctgctcaccatcaccgtcacgctcatc
gcgctcggcgtgctcgaggtcaagtggtccggcatcgcgctcgaggactggtggcggaac
gagcagttctggctaatctcaggcaccagcgcgcacctgtacgcggtggtgcagggcctg
ctcaaggtgatggccgggatcgagatctccttcacgctcacggccaaggcggcggcggac
gacaacgaggacatctacgccgacctctacgtggtcaagtggtcctcgctgctcatcccg
cccatcaccatcggcatgatcaacatcatcgccatcgccttcgccttcgcgcgcaccgtc
tacagcgacaacccgaggtggggcaagttcatcggcggcggcttcttcagcttttgggtg
ctggcgcacctctaccccttcgccaaggggctcatgggccgccgcggcaagacgcccacc
atcgtcttcgtctggtcgggcctcatctccatcaccatctccctgctctgggtcgccatc
agcccgccggaggcctctgccggcgggcgcgccgcgggcttccagttcccctga
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