Panicum virgatum (switchgrass): 120678053
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Entry
120678053 CDS
T07260
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 12 homolog A-like
KO
K03035
26S proteasome regulatory subunit N5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120678053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120678053
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120678053
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN5_C
ARM_TT21
DUF6104
DUF4376
Adeno_VII
Motif
Other DBs
NCBI-GeneID:
120678053
NCBI-ProteinID:
XP_039815151
LinkDB
All DBs
Position
2K:42547812..42551907
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AA seq
442 aa
AA seq
DB search
MAGDSSNLDAAIESLLNVEKQMRLAGDVAGTRKAVIDIVELCYKAGAWKTLNDQIVLLSK
RRGQVKQAITAMVQKAMEYIDLTPDMDTRIELIKTLSSVSAGKIYVEIERARLIKRLAKI
KEEQGKIDEAADLMQEVAVETFGSMAKTEKIAFILEQVRLCLDRQDFVRAQILSRRISTR
VFDADPSKEKKKPKEGDSIVQDAPAEIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKA
IYDIPAIKEDPAKWIPILRKICWYLVLAPHDPMQSSLLNATLEDKNLSEIPNFRLLLKQL
VTMEVIQWTSLWEFYRNEYENEKLLGGALGAKTEEDLKLRIIEHNILVVSKYYSRITLKR
IADLLCLSLQEAEKHLSDMVNSKSLIAKIDRPMGVVRFRTAQDSNGVLNSWATNLEKLLD
LVEKSCHQIHKETMIHKAVLKA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgacagtagcaacctcgatgcggcgatagagtcactcctgaatgtcgagaag
cagatgagactggccggcgatgtcgccggcacgcggaaggccgtcatcgacatcgtcgag
ctttgctacaaggccggtgcgtggaagacactgaatgaccagatcgttctcctctcgaag
aggagaggccaggtcaagcaggccattaccgccatggttcagaaagcaatggagtacatt
gatttgacaccagacatggacacacgcattgagctaatcaaaacattgagcagcgtctct
gctggcaaaatatatgtcgagatagagcgagcaagattgatcaaaagacttgcgaaaatc
aaagaggagcagggaaagattgatgaggctgctgatttgatgcaagaagttgctgtcgaa
acatttggttctatggcaaagacagaaaaaattgctttcattctcgagcaggtccgccta
tgtctggatcgtcaagattttgtccgggcacagattttatccaggagaatcagtactaga
gtatttgatgcagatccatcaaaggaaaaaaagaaaccgaaagaaggtgacagtattgtt
caggatgctcctgcagaaataccttccctcctagaattgaaacgcatctactatgaactg
atgattcgatattactcgcacaacaatgattacctggagatctgccgctgctacaaggca
atttatgatattccagctataaaagaggatccagcaaagtggataccgattcttaggaag
atttgttggtacttagtgctggcacctcatgatcctatgcaatcgagccttctcaatgct
actctagaggataaaaacctttctgagatcccaaatttcagattattgctgaagcagctg
gttactatggaggtcattcaatggacaagtttgtgggaattctacaggaatgaatatgag
aatgagaagcttcttggaggagctttgggtgccaaaactgaagaagatttgaagctgagg
attatagaacataatatcttggttgtctccaagtactattcaaggattaccctcaagagg
attgcggaccttctctgcctgagtttgcaggaggcagagaaacatctttcagacatggta
aactcaaaatctctgattgcaaagatcgacaggccaatgggtgtagtgagattccgtaca
gctcaagacagcaacggagtactcaactcatgggccacaaacctcgagaagcttcttgac
cttgttgagaagagctgccaccagatacacaaggagaccatgatccacaaggcggtgttg
aaagcttag
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