Panicum virgatum (switchgrass): 120678093
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Entry
120678093 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120678093
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120678093
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Gene cluster
GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
120678093
NCBI-ProteinID:
XP_039815190
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Position
6N:complement(34657157..34658320)
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AA seq
352 aa
AA seq
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MQDSVGKFVEISIPCGGGPAAAAAAEVVSKEIAFDDHAWTVHCYPRGAPGEAGAGAGGHL
SIHLVNHTNARNAKVLFEAIVLRRAAPVEVGGGAPARDNHHTSSVFEYPPEGSRRFSWPR
VASARDVQERCAVGGYATVVCGLAVLRHNPVPAPPSTFAADVVGFLEARKKFGDPDASFA
VGGKTFDVVRKVLAARSPVLKAELEGGATTASTFCALLLYLYCDRLPRGTECGCPVTMDL
VRDLLAAADWYGLDRLKLLCARKLWDDLSVATVSKTLWYADRYRCPELKSLCIDFLAVGD
NFKNALGRGGLRLADEELAADGPRPRDLDELRRRSSSCSSSGSVSNKRKARD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcaggactcggtcggcaagttcgtcgagatcagcatcccgtgcggcggtggtccggcg
gccgccgccgccgccgaggtggtgtccaaggagatcgccttcgacgaccacgcgtggacg
gtgcactgctacccgcgtggcgcgccgggggaggccggcgccggcgccggcgggcacctc
tcgatccacctggtcaaccacaccaacgcgcggaacgccaaggtgctcttcgaggccatc
gtgctgcgccgggccgcgccggtcgaggtgggcggcggcgcgccggcgcgcgacaaccac
cacaccagcagcgtgttcgagtacccgccggaggggtcccggcgcttctcctggccgcgg
gtcgccagcgcccgggacgtccaggagcgctgcgccgtcggcggctacgccaccgtcgtg
tgcggcctcgcggtgctgcgccacaaccccgtcccggcgccgccgtccacctttgccgcc
gacgtcgtcggcttcctcgaggcccggaagaagttcggcgacccggacgcgtcgttcgcc
gtcggcggcaagacgttcgacgtggtccgcaaggtcctcgcggcgcggtcccccgtcctc
aaggcggagctggagggcggcgccacgacggcctccacgttctgcgccctgctcctctac
ttgtactgcgaccggctgccgcggggcaccgagtgcgggtgccccgtgaccatggacctc
gtccgcgacctgctcgccgccgccgactggtacgggctggaccggctcaagctcctgtgc
gccaggaagctctgggacgacctgtccgtggcgaccgtctccaagacgctctggtacgcc
gaccgctacaggtgcccggagctcaagagcctgtgcatcgacttcctcgccgtgggggac
aacttcaagaacgccctcgggcgcggggggctccggctggccgacgaggagctcgccgcc
gacggccctcgacctcgagacctcgatgagctcagaagaaggagcagcagctgcagctct
tccggctctgtctctaacaagcggaaggcacgagattag
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