Panicum virgatum (switchgrass): 120678130
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Entry
120678130 CDS
T07260
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120678130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120678130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120678130
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
120678130
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
120678130
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
120678130
RhoA-dependent endocytosis
120678130
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120678130
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_11
MMR_HSR1
PH_8
ARGLU
Motif
Other DBs
NCBI-GeneID:
120678130
NCBI-ProteinID:
XP_039815219
LinkDB
All DBs
Position
6N:37483078..37491851
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AA seq
872 aa
AA seq
DB search
MEELAELADATLQGAALLADDDPSAADRPTPRRGSSFLTAVAIGNVGAGKSAVLNGLIGH
PVLPTGENGATRAPICVELQRDASLSNKAIVLQIEGKSQQVSASSLRHSLQDRLSKAGSS
GKGRSDEINMKLCTSTAPALKLIDLPGIDQRSMDESMIGNYAAHNDAILLIIIPALQAPD
VASSRALRIARELDSEGTRTIGVLSKIDQAAGEQKALGAVRALLVNQGPRTAADIQWVAT
IGHSVPTASVQSEVGSETSPEACWQAEVKSLISILGGAPQSKLGRVALVDSLAKQIKTRI
NVRLPNLLNGLQGKSQIVQEELAKLGEQMAQGSEGRKAIALGLCREFEDKFLEHIAGGEG
AGWKVVASFEGKFPTRIKQLPLDKHFDMKNVKRIVLEADGYQPYLISPEKGLRSLIKGLL
ELAKEPSILLVDEVHRVLLDIVSSAANVTPGLGRYPPFKREVIAIASAALDGFKNEARKM
VVALVDMERAFVPPQHFIRLVQRRMERQHQEDELKSRSTRKGQDSDKKKDTSPQKISNQS
EMKQSSNIQVLGPAGEIIAGFLLKKRAKANDWSKRWFVLNEKSGKLGYTKKQEERHFRGV
INLEDCNLEDILDDEDPPRSSKDAKKANMLDTGKDGSLMFKITHKVAYKNVLKAHNAVIL
KAESMSDKTEWVTKIQSIVDPKGLSAKRPNPSEGGAPMKQSHSDGSLDTMLKKPINPEEE
LRWISQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNHLYTSISTQSAAKIEELIQ
EDHNVKRKREKFQLQSSLLSKVTRLLSLHGNRSANASWSNDSAGSESSPRDSGHSGDEWK
SAFEAGFTTSSAGATTSRRMPSRGPPLPPNGS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactcgcggagctcgccgacgcgacgctgcagggcgccgcgctgctcgcggac
gacgacccctccgccgccgaccgcccgaccccccgccggggctcgtccttcctcaccgcc
gtcgcgatcggcaacgtcggcgcgggcaaatcggcggtgctcaacggcttgatcggccat
cccgtgctccctaccggggagaatggcgcgacaagggcgccgatctgcgtcgagctgcag
cgggatgcatcactaagcaacaaggccatcgttctgcagatcgagggcaagtcacagcag
gtctccgcgagttccctcaggcactcgttgcaagacaggttgagtaaggctggtagctct
ggcaaggggcgatcggatgagatcaatatgaaattgtgcaccagcacagcccctgcatta
aaattaatagacttacctggcatcgatcaacggagcatggacgagtcaatgattggtaac
tatgcagcacataatgatgcaattttgctaattatcattcctgctctacaagcacctgat
gtggcatcttcccgagctctaaggattgctagggaattggattcagaaggtactagaacc
attggtgtcttaagcaaaattgatcaggctgctggagaacagaaagccctgggtgctgtt
cgggccttgcttgtaaatcaaggtcctagaactgcagcagacattcagtgggtagctaca
attggacattctgttcctactgcctctgttcagtctgaagtaggttctgagacctcacca
gaagcttgttggcaagcagaagttaaaagccttatatctatacttggcggagctccccaa
agtaagcttggtcgagtagctttagttgattcacttgctaagcagataaagacacggata
aacgttaggctgccaaatctcttgaatggtcttcaagggaagtctcaaattgtccaagag
gaattagcaaaacttggagaacagatggcccaaggttctgaaggaagaaaggcaattgct
ttaggactttgtcgagaatttgaggataagtttcttgaacatattgctgggggtgagggt
gcgggttggaaagttgttgcaagttttgagggaaaatttccaactaggatcaaacaactt
cccctggacaagcattttgatatgaaaaatgtcaaaaggattgttctggaggctgatggt
tatcagccatacctgatatcacctgaaaaaggtttaaggtctctcataaaagggcttcta
gagttagcaaaggaaccatcgatacttcttgtcgatgaggttcaccgtgtattgctagac
atagtatcgtctgctgcaaatgtaactccaggacttggtagatatcctccatttaagcgg
gaggtaattgcaattgcatctgctgctttagatggtttcaagaatgaggcacgaaagatg
gtcgttgcactagttgatatggagcgggcattcgtacctccccaacattttatccgctta
gtgcagaggagaatggaaaggcaacatcaagaggacgagctaaagagtcgctctacaagg
aagggtcaagattcagacaaaaagaaagatacaagcccacagaaaatttcaaatcaaagc
gagatgaaacagtcatcaaatatacaagttctaggtcctgcaggagaaattattgctggt
ttcttactcaaaaaacgtgcaaaagcaaacgattggagcaagcggtggtttgttctaaat
gagaaaagtggaaagcttggatacaccaaaaaacaagaagagagacatttccggggtgtc
ataaatttggaggattgtaatcttgaggatattttagatgacgaagatcctccaagaagt
tctaaagatgctaaaaaggcaaatatgctagatactggaaaggatggtagtcttatgttc
aagattactcacaaggttgcttataaaaatgttttgaaagctcacaatgctgttatactg
aaggctgaaagtatgagtgataaaactgaatgggtcactaagattcaaagcattgttgat
ccgaaagggctttctgcaaagagaccaaacccttcagaaggtggtgccccaatgaagcaa
agccattcagatggttctctagatacgatgcttaagaaacccataaaccctgaagaagag
cttagatggatatctcaggaagtccgtggatatgtggaagcagtcctcaacagtcttgca
gcaaatgtccccaaggctgtggttctttgccaagttgagaaagcaaaggaagatatgctt
aatcatttatatacctccataagcacgcaaagcgcagccaagattgaagaattaatccag
gaggaccataatgtgaagcgcaagcgtgaaaaattccagttgcagtcatcccttctttcc
aaggtcactcgcctgctcagcttacatggtaatcgatcagccaatgctagttggtcaaac
gattctgcaggatcagagagtagtccaagggacagtggacactctggtgatgaatggaag
tccgcattcgaagctggattcaccacttcatcagcaggagcaaccaccagccggcgtatg
cccagtcgagggccgccactaccacccaatggtagctga
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