Panicum virgatum (switchgrass): 120678180
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Entry
120678180 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 16-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120678180
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and toxin extrusion (MATE) family
120678180
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Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120678180
NCBI-ProteinID:
XP_039815266
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Position
6N:complement(42398804..42411305)
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AA seq
482 aa
AA seq
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MATEEPLLGLSGTVAGSKHGGEEESLVWAEIKRQLCLAGPLSPAYLLQYVVQLMSLMFVG
HLGELELAGASVATSFATVTGFSLLGGMSTSLETLCGQAFSAKQHHLLGVHLQRAMLVLV
LVSVPVAAMWGYTGEILAWFGQDPEIAAAAAGYIRGLISALLVNGPLNCHMRFLQAQNAV
VPVMLGSGATALAHLPVSWLLVRALGLGSAGAALAIAVSYAANLCFLALYVRLSPRCRST
WTGFSREAFRGIPAFFRLAVPSAMMVCIEWWSFELLVLLSGLLPDPKLETAVLSIYINTI
TLAFMVPFGLGGATSTRVSNELGAGRPQAARLAAWVVVLLALMVAAIGGLVMVLVRNLWG
YAYSSDERVIKYIARMLPLLAVSFLFDCVQGVLSGAIRGCGRQKIGASINLASYYLVAIP
LGYFFAFGCHVGGMGLWFGLLCGLVVQTILLTCITLCTNWDKEAVKAQDRIHSSACHGDM
TT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaggagccgctcctgggcctgagcggcacggtcgccgggagcaagcacgga
ggcgaggaggaaagcctggtgtgggctgagatcaagaggcagctgtgccttgccgggccg
ctgtccccggcctacctcctgcagtacgtcgtccagctgatgtcgctcatgttcgtcggc
cacctcggcgagctcgagctcgccggcgcctccgtggccacctcctttgccaccgtcacc
ggcttcagcttgctggggggcatgtcgacgagcctggagacgctgtgcgggcaggccttc
agcgcgaagcagcaccacctgctgggcgtgcacctgcagcgcgccatgctggtgctcgtc
ctggtgagcgtcccggtggcggcgatgtggggctacacgggcgagatcctggcgtggttc
ggccaggacccggagatcgcggcggcggcggcgggctacatccggggcctgatttcggcg
ctgctcgtgaacgggccgctcaactgccacatgcggttcctgcaggcgcagaacgccgtg
gtgcccgtgatgctgggctccggcgccacggcgctggcccacctgcccgtctcctggctg
ctggtgcgcgcgctgggcctgggcagcgccggcgccgcgctggccatcgccgtctcgtac
gcggccaacctgtgcttcctggcgctctacgtcaggctctcgccgcgatgccggagcacc
tggacgggcttctcccgcgaggccttccgcggcatcccggccttcttcaggctcgccgtg
ccgtccgccatgatggtctgcatagagtggtggtccttcgagctcctggtgctgctctcc
ggtctcctccctgatcccaagctcgagacggccgtcctgtccatctacatcaacaccatc
accttggcattcatggttcctttcggacttggtggtgccacaagcacgcgtgtctcgaac
gagcttggcgcagggcggccgcaggcagcccgtctggcggcctgggtggtcgtgctcctg
gctctcatggtcgccgccatcggagggctggtgatggtgctcgtgcgcaacctatggggg
tacgcgtacagcagcgacgagagagtgatcaagtacattgccaggatgctgccgctcctc
gccgtctcgttcttgttcgactgcgtacagggtgtgctatcaggtgccattaggggctgc
ggccggcagaagatcggcgcctccatcaaccttgcttcctactaccttgttgctatccct
ctgggatacttcttcgcctttggctgccatgtcggaggaatggggctctggtttggcctc
ttgtgtgggctggtggtgcagacgatcttgctaacctgcatcacattatgcaccaactgg
gacaaagaagcagtgaaggcgcaggatagaatccacagttctgcttgtcatggagatatg
acaacatga
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