KEGG   Panicum virgatum (switchgrass): 120678304
Entry
120678304         CDS       T07260                                 
Name
(RefSeq) DNA polymerase delta subunit 4-like
  KO
K03505  DNA polymerase delta subunit 4
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
pvir03410  Base excision repair
pvir03420  Nucleotide excision repair
pvir03430  Mismatch repair
pvir03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120678304
   03410 Base excision repair
    120678304
   03420 Nucleotide excision repair
    120678304
   03430 Mismatch repair
    120678304
   03440 Homologous recombination
    120678304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120678304
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120678304
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    120678304
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      120678304
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     120678304
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 120678304
NCBI-ProteinID: XP_039815365
LinkDB
Position
6N:complement(51271379..51272007)
AA seq 138 aa
MAPPRGGLKGSYRQRKKAMAPAPARKKPKNAQPPQQGGDVEAEHGADAEVEEEEEALRQF
DMDTSYGPCIGITRLRRWERAAAMGLRPPPRVRDLVLRRHRNGDGPSSSLLLPNKKNSDS
SSQQQQQQLDECIWAGKV
NT seq 417 nt   +upstreamnt  +downstreamnt
atggcgccgccgcggggcggcttgaagggttcctacaggcagaggaagaaagccatggcg
ccggcacccgccagaaagaaacccaagaacgcccagccgccgcagcagggaggagatgta
gaggcggagcacggcgccgacgccgaggtagaggaggaggaggaggcgctgcggcagttc
gacatggacacgtcctacggcccgtgcatcggcatcacgaggctccggcggtgggagcgc
gccgccgcgatgggcctgcgcccgccaccgcgcgtccgcgacctcgtcctgcggcgccac
cgtaacggcgacggcccctcctcctccctcctgcttcccaataagaagaacagcgacagc
tcgtcccagcagcagcagcagcagctcgacgagtgcatctgggcaggcaaggtctag

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