KEGG   Panicum virgatum (switchgrass): 120678364
Entry
120678364         CDS       T07260                                 
Name
(RefSeq) protein PAF1 homolog
  KO
K15174  RNA polymerase II-associated factor 1
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120678364
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     120678364
SSDB
Motif
Pfam: Paf1
Other DBs
NCBI-GeneID: 120678364
NCBI-ProteinID: XP_039815445
LinkDB
Position
6N:complement(6395329..6402919)
AA seq 627 aa
MASYRPYPPPPQHPPPPPPQGGFPPQMNPYAPPPPQQAPYGRMPAPPYHTGAPPPPPPGP
PPPHQPQFNFGPGPPQQAPPPPQMYYQPPPPPYGGTSNPPPPPPSAPPPPPSPPPAAPPP
PPPPPAQLPPAQAPPPPKEQRPKAALPRAETEEERRARKKREFEKQRVEDRKQQQMMRQT
QATILQRTQQVRTSQQQPSSQSRHHHPPGGSRAAATGSRPASAPNAERFENRLKKPTTFL
CKHKFRNELPDPSAQLKWLPLNKDKDRYTKYRITSLEKNYMPKMIVPEDLGIPLDLLDMS
VYNPSAVQPPIAPEDEELLRDDEVLTPIKQEGIRKKERPTDKGVSWLVKTQYISPLSTDA
AKTSLTEKQAKERRESRMGRNAFLDSLNDREKQIKAIEESFRAAKSRPVHQTKRGMQAEW
VMPLLPDFDRYDDPFVMVNFDGDPTADSEQYNKLERPVRDECESWAVMKSFSVNGTDPTK
QEKFLAYMAPAPHELARDLDDEDDIQYSWLREYHWEVRGDDKDDPTTYLVTFDEEEGARY
LPLPTKLVLQKKKAKEGRSGDEIEHFPVPSRITVSRTAHGGTMERGESSSMHENLKRRRS
PVDDDLDEHQKHSWGDVDQYSGEEYSE
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggcgtcgtacaggccgtacccgccgccgccgcagcacccgccgcccccgccaccgcag
ggcggcttcccgccgcagatgaacccgtacgcgccgccgccgccccagcaggcgccgtac
ggccggatgccggcgccgccttaccacacgggtgccccgccgccgccaccacctggcccg
ccgccgccgcaccagccgcagttcaatttcggccccgggcccccgcagcaggccccacct
ccgccgcagatgtactaccagcccccgccgccgccctatggcgggaccagcaacccgcca
cctcctcccccttcggcgccacccccgcctccgtcccctccccctgcggccccgcccccg
ccacctccgcctccagcccagctgccgcctgcccaggccccgccgccccccaaggagcag
cggcctaaggccgcgctgccgagggccgagacagaggaggagcgacgtgcacggaagaag
cgcgagttcgagaagcagcgggtggaggaccggaagcaacagcagatgatgcgccagaca
caggccaccattctgcagaggacgcagcaggtgcgcacttcacagcagcagccgtcatcg
cagagtcgccaccaccacccaccgggtggctctcgggcagcagcaactgggtctcgccca
gcatcagcgcctaatgccgagaggtttgagaataggctaaaaaagccaacaacattcctg
tgcaagcacaagtttaggaatgaacttccagatccaagtgcccagctgaaatggctgccc
ttgaataaggataaggaccgatataccaaatacaggataacttcattggagaaaaattac
atgcctaaaatgattgtcccagaggaccttgggatacctctcgacctacttgacatgagt
gtatacaacccctctgctgttcagccacccatagctcctgaagacgaagagctactgaga
gatgatgaggtcctcacccctattaaacaagaaggtataaggaaaaaggagaggcccacg
gacaaaggtgtttcttggctggtcaaaacacaatatatatctccactgagtactgatgca
gccaaaacgtcccttactgagaagcaggcgaaggaaaggcgagaatcaaggatgggccgt
aatgctttcctggacagtcttaatgatagagagaaacagatcaaagccattgaagaatcc
ttcagagcagccaaatcacggcctgttcaccagactaaacgtgggatgcaagctgagtgg
gttatgcctctgctacctgattttgataggtacgatgatccgtttgtcatggtgaatttt
gatggagacccgactgctgattctgagcagtacaacaagcttgaaagacccgtacgtgat
gaatgtgaatcctgggctgtgatgaaaagttttagtgtcaatggtacagaccctacaaaa
caagagaagtttttggcatacatggccccagcaccccatgagcttgctagagacttggat
gatgaagatgatatccagtattcttggctaagagaatatcactgggaagtaagaggagat
gataaagatgacccgacaacataccttgtcacatttgatgaggaggagggtgcaagatat
ttgcctcttcccactaagctagttttgcagaagaagaaagctaaggaggggagatctggg
gatgaaattgagcattttccagtgccttcccgaattaccgtgagcagaacagctcatggt
ggtaccatggagcgtggagaatcttctagcatgcatgagaatttaaagcgccgaagatct
cctgttgatgatgatcttgatgagcaccaaaagcattcttggggagatgtcgaccaatat
agtggagaagaatattctgagtga

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