Panicum virgatum (switchgrass): 120678370
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Entry
120678370 CDS
T07260
Name
(RefSeq) alpha-L-fucosidase 2-like isoform X1
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120678370
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
120678370
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_95_cat
Glyco_hyd_65N_2
Glyco_hydro_95_C
Motif
Other DBs
NCBI-GeneID:
120678370
NCBI-ProteinID:
XP_039815451
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Position
6N:20900791..20922504
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AA seq
845 aa
AA seq
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MECSGNDGGEWVWVRLPTQAEAVAAAAAEQQKSPSAAATEMEEEERPLKVVFASPAEYFT
DAAPIGNGSLGGMVWGGVATEKLQLNHDTLWTGAPGNYTDPEAPAALAVVRELVNQGRFA
DATEAARRLFGGQSEVYQPLGDINLEFGATHQAYDSYKRELDLHTATVLVTYNIGEVRYM
REHFCSNPHQVIVTMISANIPGQVSCTMSLSSRLKNNVTVTNANELVMEGICPSQRPSLR
KGNSNDVTGIKFAAVVGLQIGGNTGKATVVNDQQLRLDNADWVVLVVAASSSFNGPFVNP
ADSKLDPTSIALNTLNLTRNLTYDQLKAAHLDDYQHLFYRLTIQLSRGLKDTHSLSTEKD
RLNEEVGGEIRTSADRVKSFSIDEDPSLVELLFQYGRYLLISCSRPGTQVSNLQGIWNQE
VAPAWDAAPHLNINLQMNYWPALPCNLSECQEPLFDFLASLAVNGSKTAKVNYQSSGWVT
HHVTDIWAKSSAFLKNPKHAVWPMGGAWLCIHLWEHYQFSLDKDFLENKAYPLLEGCATF
LVDWLIDGHGGYLETNPSTSPEHAFLTPDGQPASVSYSTTMDIMIIREVFSAVLLSAEVL
GKSDTDLVKNIKKALPRLPPIQIARDRTIMEWALDFQDPEIHHRHLSHLFGLYPGHTITL
EKNADVCEAAANSLYKRGEDGPGWSTTWKMALWARLFNSENAYRMVLKLITVVPPGEKVD
FEGGLYNNLWTAHPPFQIDANFGFTAAIAEMLLQSTQNDLYLLPALPRDKWPRGCVKGLR
ARGDVTVNLCWDEGELQEALLWSNHGNSVTRLHYGELVTAIAVCSSTIYKFNRGLQCLEA
WPLGK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcagcggcaacgacggtggcgagtgggtctgggtgcgacttccgacacaggct
gaggccgtggcggcagcggcagcagagcagcagaaatcaccgtcggcagcagcgacagag
atggaggaggaggagcgaccgctcaaggtggtgttcgcgtcgccggcagagtacttcacg
gacgcggcacccatcggcaacggcagcctcggcggcatggtctggggcggcgtcgccacc
gagaagctccagctcaaccatgacaccctatggaccggtgcaccagggaactatactgac
ccggaggcgccggctgctctcgcggtggtgagggaacttgtcaaccaaggacgattcgct
gatgccactgaggccgccaggcgcctcttcggtggccaatcagaagtctaccaacctctc
ggtgacataaatctggagtttggtgctacccatcaggcttatgattcctacaaaagggag
ttagatttacatactgctactgtgcttgtcacctacaacatcggagaggtgcggtacatg
agggagcacttctgctcaaatccgcatcaagtcattgtcaccatgatctctgcaaacata
ccgggacaggtctcctgcacaatgtctttgagcagccggttaaaaaataatgtgactgtc
accaatgctaatgagttggtcatggaaggtatctgcccaagtcagaggcctagtctgaga
aaaggtaactctaatgatgtaactggaattaaatttgcagccgttgttggattgcagatt
ggtgggaacactggaaaagctacagttgtgaatgatcagcaattgaggcttgacaacgca
gattgggttgtcttagttgttgcagcttcttcgtcctttaacggtccatttgtgaatccg
gcagactctaaattagatcccacatcaattgcactaaatacattgaacctcactaggaat
ttaacatatgaccagctcaaagctgcccatttggatgattatcagcacctcttttaccgt
cttaccatacagctttcacgaggattgaaggacacgcatagtttgtcaactgaaaaggac
agacttaatgaagaagttggtggagaaatcagaacatcggcagacagggtcaagagtttt
agcattgatgaggatccttctcttgttgagctgttgttccaatatgggcgatacctttta
atttcatgctccaggccagggactcaggtttctaatctgcagggaatatggaaccaagaa
gttgctcctgcatgggatgcagctcctcatcttaacatcaatcttcagatgaattactgg
ccagcgctgccttgcaaccttagtgaatgccaggaaccattatttgacttccttgcatct
cttgcagttaatggtagcaagacagcaaaagtcaattaccagtcaagtgggtgggtaacg
catcatgtcacagatatatgggcgaagtcttcagccttccttaagaatccgaagcatgca
gtgtggccaatgggaggtgcatggctttgcatacatctgtgggagcactaccagttttca
ctggacaaagactttttggagaataaggcatatccattgctggaaggttgcgccaccttt
ctggttgactggttgattgatggacacggaggttatcttgaaacaaatccctcaacatct
ccagagcatgcttttctaactccagatggtcagccagcaagtgtgagctactcaacaaca
atggacatcatgatcattagggaggttttctcggctgtccttctatctgcagaggtctta
gggaaatctgatactgatttggtgaagaacatcaagaaagcactcccaaggctccctccc
atacagattgcaagagatcgtactatcatggagtgggcactagatttccaggacccagaa
atccatcataggcacttgtcacatctctttggactttaccctggacatactataaccttg
gagaaaaacgctgatgtttgtgaagctgcagcgaacagcctttataaaagaggtgaagat
ggtccaggatggtcgacaacatggaagatggccctatgggcacgccttttcaacagtgag
aacgcgtacagaatggtcttaaaattgatcactgtggttcctcctggtgaaaaggttgac
ttcgaaggaggactgtacaacaatctgtggactgcacacccaccattccagatcgatgca
aattttggattcacagctgctattgctgagatgctgcttcagagcacacagaatgatctg
tacctgctccctgccctgccacgcgataagtggcccagaggctgtgtcaaggggctcagg
gctcggggtgatgtgactgtcaacctatgctgggatgaaggggagcttcaggaagcattg
ttatggtcaaaccatgggaactcagtcacaaggctgcactatggtgaactggttactgcc
atcgcagtttgcagcagcactatttacaagttcaacagaggattgcagtgcttggaggct
tggccccttggcaagtaa
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