Panicum virgatum (switchgrass): 120678407
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Entry
120678407 CDS
T07260
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120678407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120678407
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120678407
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
120678407
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120678407
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120678407
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
PH
BAR
Ank_3
Ank_4
Ank_5
PH_8
PH_11
ANK_LRRK2
PH_20
BAR_2
PH_13
ARM_TT21_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
120678407
NCBI-ProteinID:
XP_039815521
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All DBs
Position
6N:complement(50450342..50461837)
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AA seq
851 aa
AA seq
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MGSCKVLSLKYVAEQCEKLLLQRDSLMLSNLAGIFIQSLEESAELLRERCLKFHKGCRKY
TEGLGEAYDGDIAFASSLEIFGGGHNDPISVAFGGPVMNKFTIALREIGTYKEVLRSQVE
HMLNDRLLNFVDIDLHDVKDAHKRFDKASLVYDQIREKYLSLKKGTRPDITTAIEDELHS
ARSSFEQARFNLVTSLSHIESKKRFEFLEAVSATMDSHLRYFKQGYELLHQMEPYINQVL
AYAQQSRERANKEQASLVERMHEYKRQIDRESRSSVNGLSDCYNGDGIQTIGRSSHKMIE
AVMQTASKGKVQTIRQGYLSKRSSNLRADWKRRFFVLDSRGMLYYYRKQITRPPGGCSIQ
RGVNPPEHGSGLLSRLFSSHYHGIIHDDKSVARHTVNLLTSTIKVDAEQSDLRFCFRIIS
PTKVYTLQAESAIDQMDWIEKITGVIASLLTSQSPEQFLLLSPKGSGHDRSTSESSSFTS
SVEFEPSTIDDLILEKYSANGQHDVRGTHHHRTNMKPEKPIDLLRKVDGNNMCADCGASE
PDWASLNLGALLCIECSGVHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNMFVNNIW
EEMLPSSNNGRPDDNLSADGSDSSHYLSVRKPKHKDAFSAKEKFIHAKYVDKEFIRNHSM
DESHLAQQMWNSVAANDKKAAYSLIVRSRANVNFVWGDMHSSSCLTLGKALQLEQPALTP
DGSPRFFDCNSHDKISPRESLSPASTSSRTDDMEDSCEGFSLLHLACRVADVGMVELLLQ
YGSSVNMTDSKGRTPLHHCILKGRHQHAKLLLSRGADSQAMDRDGRTALQYAIDGGTSDE
DILILLEDHSR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgggctcatgtaaggttttgagtttgaaatatgttgctgaacagtgcgaaaaattgctt
cttcaaagagattccttaatgctatccaatttagcaggcatttttatacagtcacttgag
gagagtgctgaattgctgagagagagatgtttgaaattccataaaggttgccgcaagtat
actgaaggactaggggaagcatatgatggagacattgcatttgcaagctcacttgaaata
tttggaggaggccacaatgatccaattagtgttgcttttggtggacctgtcatgaacaaa
tttacaattgccttgagagaaattgggacatacaaggaagtcctgcgctcccaggttgag
cacatgttgaatgacagattgctgaattttgtggatattgatttgcatgatgtgaaggat
gctcataagcgttttgacaaggctagcctcgtatatgaccagattcgtgagaagtaccta
tcattgaagaaaggcacaaggccggacataacaactgcgattgaggatgagctccacagt
gctagatcttcatttgagcaagctcgtttcaacctggtcacatcactttcccacattgaa
tcaaagaagagatttgaatttttggaggctgttagtgctacgatggactcacatcttcga
tatttcaaacaaggatatgaattattgcatcaaatggagccatatattaatcaggtcctt
gcttatgctcagcaatcaagagaaagggcaaacaaggaacaagcttctcttgtggagagg
atgcatgagtacaaaaggcagatagaccgggaaagtcggtcttctgtaaatggtttgagc
gattgttacaatggtgatggaatacagacaattggtagaagttcacataaaatgattgag
gcagtgatgcagacagcctcaaaaggcaaggttcagaccattcgtcaaggttacctttca
aagagatcatcaaacttgagagctgactggaaaagaaggttctttgtacttgatagtcga
ggaatgttgtactactatcgcaaacaaattactaggccacctggtggttgttccatccaa
agaggcgttaacccccctgaacatggttctgggttgttgagcagattgttctcttctcat
taccatggtattatacatgatgataagtctgttgcacggcatactgtaaatttgttgaca
tcaacaattaaagttgatgcagagcaatcagatctgaggttctgcttcagaattatttca
cctacaaaggtctacacactgcaggcagagagtgcaatagatcagatggattggattgaa
aaaataactggtgttattgcctccctgctgacctcccaatccccagaacagtttttgttg
ttaagccctaagggcagtggccatgacaggagtaccagtgagagtagctcctttactagt
tcagtggaatttgaaccttccacaatcgatgatttaatactggagaagtattctgcaaat
gggcagcatgatgttagaggcacacatcatcacagaaccaacatgaaacctgaaaaacca
attgacttgcttaggaaagtcgacggcaataatatgtgtgctgactgtggtgcttcagaa
cctgattgggcatctctaaaccttggcgcccttctttgcatagagtgttctggggtgcac
agaaatcttggagtccatatatcaaaggtaagatctctgacacttgatgtcagagtttgg
gagccatctgtaatcaatctctttcagtcattaggcaacatgtttgtcaacaatatttgg
gaagagatgttaccttcatcgaataatggtcgtcctgatgataatttaagtgctgatgga
tcggactcatcacattacctctctgttagaaagcctaaacacaaagatgctttctctgcc
aaagagaagtttattcatgccaagtatgtagacaaagaattcatacggaaccatagcatg
gatgagagtcacctagctcagcagatgtggaatagtgtagctgcgaatgacaagaaagct
gcatacagtctcattgtgagatcacgtgcgaacgtaaattttgtttggggagatatgcat
tctagttcatgtttgactcttggaaaagcacttcaattagagcaaccagctttgacacct
gatggaagtcctagatttttcgattgcaattctcatgacaagatttctccaagagagtcc
ctttcccctgctagcacaagttcacgcacagatgacatggaggacagttgtgaaggtttc
tccttgcttcatcttgcatgccgtgttgcagatgttgggatggttgaattactattgcag
tatggctctagtgtaaatatgactgattcaaagggtcgaacaccccttcatcactgcatt
ttgaaaggaagacatcagcatgccaagcttctcctctccagaggggccgattcacaagcc
atggatcgagatggtagaacagcattacagtatgcaattgatggtggaacaagcgatgaa
gatattcttattttgttagaggaccatagtagataa
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