Panicum virgatum (switchgrass): 120678431
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Entry
120678431 CDS
T07260
Name
(RefSeq) chloride channel protein CLC-f-like
KO
K03281
chloride channel protein, CIC family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120678431
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120678431
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Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
YLDV-IL18BP-like
Flavodoxin_NdrI
Motif
Other DBs
NCBI-GeneID:
120678431
NCBI-ProteinID:
XP_039815551
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Position
6N:45952189..45957999
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AA seq
746 aa
AA seq
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MAGSDLEPLRAGAAALPSSSDPDSPATPRRSRMRDLLRNLDRRLSNRSRGGEGAAAPGHS
GAEAGASPRRGEEDSDELGDGAPPEWALLLVGCLLGLATGICVAVFNRGVHVIHEWAWAG
TPTEGAAWLRLQRLADTWHRILLIPVTGGVVVGMMHGLLEIFEQIKQSLSSQREGIDPMA
AIFPTIKAIQAAITLGTGCSLGPEGPSVDIGKSCANGCAEMMENNRERRIALVAAGSAAG
IASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNVLLGEKAAFIVP
TYELKSAAELPLYLILGMLCGVVSVAFRQLVVWFTKTFDLIRKKFGLPAVVCPALGGLGA
GLIALRYPGILYWGFTNVDEILHTGKSASAPGIWLLAQLAAAKVVATALCKGSGLVGGLY
APSLMIGAAVGAVFGGSAAELINSAIPGNTAVAHPQAYALVGMAATLASVCSVPLTSVLL
LFELTKDYRILLPLMGAVGLAIWVPSVVNQSGSKDSEATSPRHGYSSLLPPADRNETDWR
RQDRDDVELAILDVDPYNYGSNNEEMLLDDLKVSQAMSKHYVKVTPTFTIKETTRLMQEK
QQSCVLVVDNEDFLEGIVTLGDIRRKGYEPSENSHSTGENSSTLDENSSPVSSCLTRGFQ
FHGNERGLVTCFPDTDLSTAKVLMEVKGIKQLPVVKRGAGRRNDGRRKVLGLLHYDSIGW
CLREELERWKAIYQRENFQQTTVNGH
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcggggagcgacctggagccgctgcgcgccggcgcggccgcgctgccgtcgtcgtcg
gacccggactcgcccgcgaccccgcggcggagccgcatgcgggacctcctgcggaacctg
gaccgccggctctcgaaccggagccgcggcggcgagggcgccgcggccccggggcacagc
ggcgcggaggcgggggcttcgccgaggaggggcgaggaggacagcgacgagcttggggac
ggcgcgccgcccgagtgggcgctgctgctcgtcgggtgcctcctcgggctcgccaccggc
atctgcgtcgcggtgttcaatcgtggggtacatgttatacatgaatgggcatgggcaggc
acacccacagagggtgctgcttggctccgtcttcagaggctggccgatacttggcatagg
attttgttgattccagtgactggtggagtagttgttgggatgatgcatggattattggag
atctttgagcagataaagcaatcattatcatctcaaagggaaggtattgatcctatggcc
gcaatctttcccacaatcaaggccatccaagctgccattactttaggaacggggtgttca
ctggggccagaagggcctagtgttgatattggcaaatcttgtgcaaatggatgtgctgaa
atgatggagaacaacagggaacggaggattgctcttgttgcagctggatcggctgctgga
attgcttcaggtttcaatgcagcagttgctggatgcttttttgctatcgaaacagtattg
agacctcttcgagcagagaactcaccaccatttactactgccatgattatattggcatca
gttatatcatcaactgtgtccaatgttttgctaggggaaaaggcagcgtttattgtcccg
acgtatgaactaaaatctgctgctgagttgccactctaccttattctaggcatgctttgt
ggagttgtgagtgtggcattcaggcagttggttgtttggttcaccaagacttttgacttg
ataaggaaaaagtttggccttcctgctgtagtatgtcctgctttaggtggtcttggagca
ggtttaatagcactaaggtaccctgggatattatattggggtttcactaatgttgatgag
attttacatactggtaaaagtgcttctgcccctggaatctggcttttagctcaattagct
gctgcaaaagttgttgcaactgcactttgcaaaggttctggtcttgttggtggcctttat
gctccaagtttgatgattggcgctgctgttggtgctgtttttggaggctcagcagcagaa
ttaataaactctgccattccgggtaacactgctgtcgcacatcctcaagcttatgcgcta
gtgggaatggctgctacgctggcttcagtctgttctgtcccattgacatctgtgctactg
ctctttgaattgaccaaggattacagaattctacttcctctgatgggagctgttggttta
gcaatatgggtcccctctgttgtaaatcaatctggtagcaaagatagtgaggcaacatct
cctcgacatggttactcttcactattacctcctgctgataggaacgagacagattggagg
cgacaagatagggatgatgttgaacttgcaattcttgatgttgatccctacaactatggt
agtaacaatgaggagatgcttctagatgacttaaaggtatcgcaagcaatgtcaaagcat
tatgtgaaggtcacgcctacattcaccatcaaggagacaacaaggctgatgcaagagaag
cagcaaagttgtgttcttgttgtagataatgaagattttctggagggaattgtaacatta
ggtgatattcgtcgtaaaggatatgaaccaagtgaaaattctcatagtacaggggaaaat
tcatctaccttggatgaaaattcttctcctgtctcatcatgcctcacacgaggttttcag
ttccatggcaatgaaagaggactagtaacctgctttcctgatacagacctgagcactgct
aaggttctaatggaagtgaaaggaattaagcaacttccagtggtcaaacggggtgctggt
cgaagaaatgatggaaggcgtaaggtccttggtcttcttcattatgattcaataggatgg
tgcttgagggaagagcttgagcggtggaaggcaatataccagagagagaatttccagcag
acaacagtgaatgggcactga
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