Panicum virgatum (switchgrass): 120678500
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Entry
120678500 CDS
T07260
Name
(RefSeq) transcription termination factor MTERF6, chloroplastic/mitochondrial-like
KO
K15031
mitochondrial transcription termination factor family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120678500
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120678500
Translation factors [BR:
pvir03012
]
Eukaryotic type
Release factors
120678500
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
120678500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mTERF
Motif
Other DBs
NCBI-GeneID:
120678500
NCBI-ProteinID:
XP_039815661
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Position
6N:complement(47834726..47836207)
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AA seq
332 aa
AA seq
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MASSVRGSKSLAQWLRENGFDEETVARMSRRCKNLHSLDAGEASGVWDYLLTSVKIERRR
LRHVVAKCPKVLTLPVDGKLVPTVQCLATLQAKPGEVAQAIAKFPQILFHSVEEKLCPLL
AFFQTLGVSEKQLAKLLMVNPRLISYSIEAKFSQMVDFLVGLGIDKEGMIGKILTKEPYI
MGYSVDKRLRPTAEFLKSGVGLQGSDLKRVIMSFPDILSRDVDKILRPNLAFLQSCGFSK
SQVMALVAGYPPVLIKSVKHCLEPRIKFLVDEMGRDMGEVVDYPQFFRHGLKRSLEYRHK
VLKQNKSSCSLSEMLDCNQKKFAMKFGLVAAV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcagtgtcagaggttccaagagcctggcgcagtggctgagggagaacgggttc
gacgaggagaccgtcgcgcgcatgtcgaggaggtgcaagaacctgcacagcctcgacgcc
ggcgaggcctcgggcgtctgggactacctcctcaccagcgtcaagatcgagcggcggagg
ctgcggcacgtggtggccaagtgccccaaggtgctcaccctgcccgtggacggcaagctc
gtgcccacggtgcagtgcctcgccacgctgcaggccaagcccggggaggtggcgcaggcc
atcgccaagttcccgcagatactcttccacagcgtggaggagaagctctgcccgctcctc
gccttcttccagacgctcggcgtctccgagaagcagctcgccaagctgctcatggtcaac
ccgcgccttatcagctacagcatcgaggccaagttctcgcagatggtggacttccttgtc
ggcttaggcattgacaaggaaggcatgatcggaaagatcctgaccaaggagccttacatc
atggggtatagtgtcgacaaacggcttcgtcccactgccgagttcctcaagtcgggggtc
gggttacaggggtcagatctcaaaagggtgatcatgagcttccctgatatattatcacga
gatgtggataagattctgcggcccaatttagcgttcttgcagagctgcggtttcagcaag
agtcaggttatggcattggtggctggataccctcctgttctcatcaagagcgtcaaacat
tgcttggagccaaggataaagttcctggtcgacgaaatgggacgggacatgggtgaggtg
gtagattacccccaattctttcgacatggcctcaagaggagcctggagtaccgtcacaag
gtgctcaagcagaataagtcaagttgcagcctcagcgagatgctagactgtaatcagaag
aagtttgccatgaaatttggtttggttgcagcagtttag
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