Panicum virgatum (switchgrass): 120678581
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Entry
120678581 CDS
T07260
Name
(RefSeq) GDP-mannose 3,5-epimerase 1-like
KO
K10046
GDP-D-mannose 3', 5'-epimerase [EC:
5.1.3.18
5.1.3.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00053
Ascorbate and aldarate metabolism
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
pvir01250
Biosynthesis of nucleotide sugars
Module
pvir_M00114
Ascorbate biosynthesis, plants, fructose-6P => ascorbate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
120678581
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120678581
Enzymes [BR:
pvir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.18 GDP-mannose 3,5-epimerase
120678581
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
NAD_binding_10
Polysacc_synt_2
RmlD_sub_bind
NmrA
adh_short
Motif
Other DBs
NCBI-GeneID:
120678581
NCBI-ProteinID:
XP_039815767
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Position
6N:complement(5855240..5858597)
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AA seq
380 aa
AA seq
DB search
MGSSEKTVSAYGEYTYAELEREPYWPSEKLRISITGAGGFIGSHIARHLKSEGHYIIASD
WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTQGVDHVFNLAADMGGMGLIQSNHSVIMYN
NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKL
ATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTERFEMWGDG
LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDRKLPIHHIPG
PEGVRGRNSNNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKKQGFDIAAYGSSKVV
STQAPVQLGSLRAADGKEGL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagcgagaagaccgtcagcgcttatggtgagtacacctatgctgagctggag
agggagccctactggccgagtgagaagctgaggatttcgattactggggctggtggtttc
attggatcccacattgctcgccatctcaagagcgagggccattacatcatcgcctctgac
tggaagaagaatgagcacatgacagaggacatgttctgccatgagttccatcttgttgac
ctcagggtcatggacaactgtctcaaggttacccaaggcgtcgaccatgtattcaatctt
gctgctgatatgggtggcatggggttaatccagtcaaaccactctgtcatcatgtacaac
aacaccatgatcagtttcaacatgcttgaggctgcacgcatcaatggtgtgaagaggttc
ttctatgcctcgagtgcatgcatttaccctgaattcaagcagcttgacacaaatgtgagc
ttgaaggaatctgatgcctggcctgctgagcctcaagatgcctatggcttggagaagctt
gcaactgaggagctgtgcaagcactacaccaaggactttggcatcgagtgccgcattggg
cgtttccacaacatttatggcccatttggaacatggaaaggtggtcgtgagaaggcaccg
gctgccttctgcagaaaggctcagacatctaccgagaggtttgagatgtggggtgatggc
ctccagacacgatccttcactttcatcgacgagtgcgtcgagggtgttctgaggctgacc
aagtcagacttccgcgagccggtgaacattgggagcgacgagatggtgagcatgaacgag
atggccgagatcgtcctgagcttcgaggataggaagctgcccatccaccacatccctggc
ccggagggggtccgcgggcgcaactccaacaacaccctcatcaaggagaagcttggctgg
gccccgacgatgaagctcaaggacgggctgaggttcacctacttctggatcaaggagcag
atcgagaaggagaagaagcaggggttcgacatcgcggcgtacgggtcctccaaggtggtg
tccacccaggcgcccgtgcagctgggctccctccgcgccgccgacggcaaggagggtctc
tga
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