Panicum virgatum (switchgrass): 120678586
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Entry
120678586 CDS
T07260
Name
(RefSeq) glutamate decarboxylase-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00410
beta-Alanine metabolism
pvir00430
Taurine and hypotaurine metabolism
pvir00650
Butanoate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120678586
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120678586
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
120678586
00430 Taurine and hypotaurine metabolism
120678586
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
120678586
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
120678586
NCBI-ProteinID:
XP_039815770
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Position
6N:complement(43156145..43160338)
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AA seq
500 aa
AA seq
DB search
MVVSVAATGAGTDAEPVTSTFFASRYVRDPLPRYRMPERSIPREAAYQIINDELMLDGNP
RLNLASFVSTWMEPECDKLIMGSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIKEDE
TAVGVGTVGSSEAIMLAGLAFKRTWQNKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV
ELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKQLNDLLTEKNKETG
WDVPIHVDAASGGFIAPFLYPELVWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDL
PEELIFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMENCMENAAILRE
GIAATGRFDILSKDAGVPLVAFSLKDSSRFSVFDISENLRRFGWIVPAYTMPADAEHVAV
LRVVIREDFSRSFSERLVNDVLKILRELDARATHAVRVASATAAQSGDGGVVARKSVLEI
EREVAARWRDAVNKKKTGPC
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcagcgtggccgcgaccggggccggcacggacgccgagccggtgacctccacc
ttcttcgcgtctcgctacgtccgcgacccgctcccacggtaccggatgccggagcggtcg
atcccgcgggaggcggcgtaccagatcatcaacgacgagctgatgctggacggcaacccg
cggctgaacctggcgtccttcgtctccacctggatggagcccgagtgcgacaagctcatc
atggggtccatcaacaagaactacgtcgacatggacgagtaccccgtcaccacggagctc
cagaaccgttgcgtaaatatgatagctcacctgttcaacgcaccgattaaggaggatgag
accgctgtcggggttggaacagtgggatcctcagaagcaattatgcttgcaggcctagca
ttcaagaggacatggcaaaacaagaggaaggaacaggggaagccgtatgacaaacccaac
attgtcactggtgctaatgttcaggtttgctgggagaaattcgcaagatattttgaagta
gagctaaaggaggtgaagttatctgaaggatattacgtcatggaccctgtcaaggctgtt
gagatggtggatgagaacaccatatgtgttgcggctatcttgggatctactctcacagga
gagtttgaagatgtcaagcaattgaatgaccttcttaccgaaaagaacaaggaaactggg
tgggatgtgccgattcatgttgacgctgcgagcggaggattcatagcgcctttcctgtac
cctgagcttgtatgggacttcaggctgccgctagtgaagagcatcaatgtcagtgggcac
aagtatggccttgtctacgctggtgttggttgggtaatttggaggagcaaggaggatttg
cctgaagagctcattttccatataaactacctagggacagatcagcctacgttcacgctc
aacttctccaaaggttctagtcagatcatagcacagtactatcagctcattcgccttggc
ttcgaggggtacaagaacatcatggagaactgcatggagaacgccgcgatcctgcgggag
ggcattgcagcgactggccggttcgacatcctgtccaaggacgccggcgtgccgctggtc
gccttctcgctcaaggacagtagccggttcagcgtgttcgacatctcggagaacctgcgg
cgattcgggtggatcgtgccggcgtacaccatgccggcggacgcagagcacgtggccgtg
ctccgcgtcgtcatccgggaggacttcagccggagcttttcggagcggctcgtcaatgac
gtcctcaagatcctgcgcgagctggacgcccgcgccacccacgccgtgcgggtcgccagc
gccaccgcggcgcagtcgggcgacggcggcgtcgtggccaggaagagcgtcctggagatc
gagcgggaggtcgccgcgcgctggagggacgccgtgaacaagaagaagaccgggccgtgc
tga
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