Panicum virgatum (switchgrass): 120678600
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Entry
120678600 CDS
T07260
Name
(RefSeq) vacuolar fusion protein CCZ1 homolog isoform X1
KO
K27045
vacuolar fusion protein CCZ1, animal type
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120678600
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Others
Others
120678600
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Motif
Pfam:
Intu_longin_1
Intu_longin_2
Intu_longin_3
Motif
Other DBs
NCBI-GeneID:
120678600
NCBI-ProteinID:
XP_039815786
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Position
6N:37794428..37800034
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AA seq
513 aa
AA seq
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MGLSAAAAGDGTQLCVFDLRRGQQEGQELDKILFFHPADCPILLQLSVIGLCEGIVTFTR
IFSPEEDCEVIESEKRSHVFYQAEPDIWMVLVVEKTKDNESNWRCGALQGILKEAHSLFT
MFHGPIRTLLDRQPSAELARGHLRTFLTDYLSDFHVGKKIQFPTYRDSLKERGTIQMLTV
PREVALEVQSLTTVLGSCLGNVTCQSLILFEDLLVSTTLPPDDTLNLYTYAVLRLTPRAL
SSNASSWSYLRKGTSVSAGPTSSSSNGTTAGERYHSRSRDTSPDGQNQMHHNFRPLLREK
LSKGKDGFVAADFAATEVRGAVPLTPIIWFQQAEERMYLCIYQHKSLTILLLIPASSLIN
GEEGIAHVKKQMLENASQKIVTVEQKLTRGWGGENAYHVSGYRYLLVDPDRRVSRASPPG
KVTTLAKDSLLALNRLRQEVDLEKSRYRRSDPSHDKDFEVCIRTKNNAWVIAKITRGREL
YMALEKGGETLLYASTAVEKFSNRYCEGAFSTD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggggctctcggcggccgccgcgggcgacggcacgcagctctgcgtcttcgacctccgg
agggggcagcaggagggccaggagctcgacaagatcctcttcttccaccccgccgactgc
cccatcctgctccagctctccgtcatcgggctctgcgagggaatcgtcactttcacaaga
atattttctcctgaagaggattgtgaagttatagaatctgagaagcgctcccatgttttt
tatcaagcggaacctgatatttggatggttctggttgtggaaaaaaccaaggacaatgaa
tcgaactggcgttgtggtgcactgcaagggatacttaaagaggcccattcgcttttcaca
atgttccatggaccaatccgaactttacttgacagacaacccagtgcagaacttgcccgt
ggtcacctccgcacatttctcacagattatttgagtgattttcatgttggtaaaaagata
cagttcccaacctaccgtgacagcctaaaggagaggggaacaatccaaatgctcacagta
ccaagagaagtagcacttgaagttcagtcactcaccacagttcttggatcatgtcttgga
aatgtcacctgccaatcactcatattgtttgaagacctattggtgtctacaacactgcct
ccggatgatactttaaacctgtatacttatgctgtcttgaggttaactccccgtgcctta
tcttccaatgcaagctcttggtcctatttgcggaaaggaacttctgttagtgcaggccct
acttcaagttcatcaaatggaacaactgcaggagaaaggtaccatagtcgatctcgtgat
acttctcccgatggacaaaatcagatgcatcataatttcaggcctctcctgcgtgagaaa
ttgtcaaagggaaaggatggttttgttgctgctgatttcgcagctacagaagttcgtggt
gctgtacccttgactccaataatctggttccagcaggcagaggagcgcatgtacctatgc
atttatcagcacaagagtctcactatccttttgctaattcctgcttcctcactaataaat
ggagaagagggcatcgctcatgtgaagaagcagatgcttgaaaatgcatcacagaagatt
gtcactgttgaacagaaactgacacgcggatggggaggagaaaatgcttatcatgttagt
ggatatcgttacttgctggttgatccggacagaagggtatcaagagcctccccgcctggg
aaagtcaccaccctggcaaaggattcgctacttgccctcaataggctaagacaagaagta
gatttagagaagtcaagatacaggagaagtgaccccagtcatgataaggattttgaagta
tgcatcagaacaaaaaacaatgcatgggtgattgctaaaattactcgaggaagggagctt
tacatggctttagagaagggtggtgaaacacttctttatgcatccacagctgtagagaag
tttagcaacaggtactgcgagggagcgttctctacggactga
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