Panicum virgatum (switchgrass): 120678666
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Entry
120678666 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120678666 isoform X1
KO
K03860
phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
120678666
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Gene cluster
GFIT
Motif
Pfam:
Gpi1
DUF4327
Motif
Other DBs
NCBI-GeneID:
120678666
NCBI-ProteinID:
XP_039815874
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Position
6N:complement(52260495..52269164)
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AA seq
759 aa
AA seq
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MAIERCRIWWPRQELQLDQGPVPVRLILFGWFFTSGASLDIVISAAVPQDQILRSFATLD
TLQTIILSSNKRMPVSLQESATFTILGDCGRHLPGELEECCCTKQLPLDAQSVQREHSGT
SRNNVMIRSVGNGDQHPSYGNRKWECDCCVLDGFLDACRKSAVKEGSWVHFFCKSGNSDR
SNLNQVPALGHLYIDGQLIEINHCHVILYEVPTFGRNHFSLGVDAPRELKASFKKPNWIN
DLQKQPSFLDLDSILLALNCSNAARLPVTQECSTSSSGPYFAFASVYDALVQVTWHCMGI
FLASASTILYIMIIVFRKCLCHMSQYLMLHKVFKHSWNNIQRRSCQILYWPIVLRDTSLS
STVNMEYAHKAAIRKHALWSSIAVDLLMGFVLGAVFLLNTETICIWTIALVHHMTDAILR
SGCVWLMGVPAGFKLNTELAELLGMISLNAVQIYSTLWFFVGAYLRHIIQGIAFSGIILG
LTAPVSFFIDIIQLATLHVTMLHWLISSIYSRQIQTVASLWRLFRGRKWNPLRQRLDSYD
YTVEQHVVGSLLFTPVLLLIPTTSVFYVFFSILTTTVIWVCVMLEIAIAVIQSTPYAELT
LWMTRRQRFPAGIFFLHVPSSSGHTFEDDDLSAHPIRGCNERKTKDTVHEQSESLVSELN
CNYATLVQVIRSNYERVFNRTGFSFCKQLAYGILSGERVPSSLHLQPSPSFPWMNIGITE
YWMHCRDSVLSCAPKRSVGTNGQVLLSHLLCNTCITRIL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgagcgctgcaggatctggtggccgcgccaggagctgcagctcgaccagggg
cccgttccggtgaggctcatcctgttcggatggttcttcaccagtggcgcttcccttgac
atcgtcatctccgcggctgtcccccaggatcagatcctgcggtcttttgccacgctcgac
actctccagaccatcatcctttcttcaaataaaaggatgcctgtaagcctgcaagaatct
gctacatttaccattcttggggattgcggtcgacatctccctggagaattagaagaatgc
tgctgtactaaacaactgcccttggacgcacaatcggttcagagagaacattctggcaca
agcagaaacaatgttatgatcagatcagttgggaatggggatcagcatccaagttatggt
aatagaaaatgggaatgcgattgttgtgtgttagatggttttctggatgcttgcagaaag
tctgcagtcaaagagggtagctgggtgcacttcttttgcaaatctggaaacagcgatagg
agcaacttaaatcaagttccagctcttggccatctgtatattgatggccaactgattgaa
atcaatcattgccacgttatactatatgaggttccaacctttgggagaaaccatttttca
ctgggtgtggacgcacctcgtgagttgaaagcttctttcaaaaagccaaactggataaat
gatctgcaaaaacaaccatcatttcttgatttggattcaattcttttggcactcaattgt
tcaaatgcagctagactgccagtcactcaggaatgctctaccagcagctctgggccttat
ttcgcctttgcatcggtatatgatgccctggttcaagtgacatggcactgcatgggaata
ttcttggcttcagcatcaactattctctatatcatgattatagtgttccgaaaatgttta
tgccatatgtcccagtacttgatgctacataaggttttcaaacattcatggaataacatt
cagcgtcgcagttgtcaaattctttactggccaattgtcctccgagatacctccctaagc
tccactgtgaacatggagtatgcacacaaagctgcaattcggaagcatgctctgtggtca
agtatcgctgtggatctcctgatgggttttgtccttggagcagtatttttattaaatacg
gagacaatttgtatttggactattgctctcgtccaccacatgacagacgcaatcttacga
tctggctgtgtgtggctgatgggtgttccggctggctttaagctgaatacagagttagca
gagcttttaggcatgatttcactgaatgcagttcaaatttactctaccctttggttcttt
gtgggagcctacctgaggcatataattcaaggaattgcattttctggaattattttgggt
ttgacagctccagtttcattctttattgatattatccagcttgctacattgcatgttact
atgcttcactggttaatatcatcgatatattcaagacagattcagactgttgcatccttg
tggcgtcttttcagagggcgcaaatggaatcctcttaggcagaggttagatagctatgac
tacacagttgaacagcacgtggttggttccttgctgtttacaccggtcctactccttata
cctacaacttctgtattctatgtattcttctctatcttgactacaacagttatctgggtg
tgtgtgatgctggaaatcgcaatcgcggtaatccaatctacgccttatgctgagttaact
ctatggatgacgaggaggcaaagatttcctgctggtatatttttccttcacgtgccatcc
tcatctggacatacctttgaagatgatgacctatcagcccatccaatcagaggttgcaat
gaaaggaaaacaaaggatactgtacatgaacaatcagagtcattagtttcagaacttaat
tgcaactatgccactcttgtccaagtaatcagatcaaattatgagagagttttcaacagg
acgggtttctccttctgcaaacaattggcatacgggatccttagtggtgaaagggtgcct
tcatcgctgcatcttcaaccgtctccttcatttccctggatgaacattggtatcacagaa
tactggatgcattgccgtgattctgtactttcatgcgcaccgaagagatctgttggaaca
aatggccaagtattgttgtcccatcttttatgcaatacttgcataacaagaatattataa
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