KEGG   Panicum virgatum (switchgrass): 120678670
Entry
120678670         CDS       T07260                                 
Name
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00020  Citrate cycle (TCA cycle)
pvir00190  Oxidative phosphorylation
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01200  Carbon metabolism
Module
pvir_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pvir_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    120678670
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    120678670
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     120678670
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 GIDA Thi4 FAD_binding_3 HI0933_like
Other DBs
NCBI-GeneID: 120678670
NCBI-ProteinID: XP_039815885
LinkDB
Position
6N:complement(1595941..1601621)
AA seq 619 aa
MWRSCVSRGLSRARASASRLLSTAPSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNT
ACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDSIQYMCREAP
KAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQ
AMKHNTQFFVEYFALDLIMDNEGNCQGVIALNMEDGTLHRFRASNTILATGGYGRAYFSA
TSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERF
MERYAPSAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISET
AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVDIKGDNPDAVIPGLLAAGEAACAS
VHGANRLGANSLLDIVVFGRACANRVADISKPGQKQKPLEKDAGEKTIAWLDKLRNANGS
LPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLISKTWESFHDVKLSDRSLIWNSDLIET
IELENLLINACITMYSAEARKESRGAHAREDFTTRDDEKWMKHSLGYWENEKVRLAYRPV
HMNTLDDEVESFPPKARVY
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgtggcgcagctgcgtctcgcggggcctctccagggccagggcctccgcctccaggctc
ctctccacggcaccgtcgtcctacacggtggtggaccacacgtacgacgcggtggtggtg
ggggccggcggcgcggggctccgggcggccatcggcctctccgagcacggcttcaacacg
gcatgcatcaccaagctcttccccacgcgctcgcacactgtcgccgcacagggaggcata
aatgctgcacttggaaacatgactgaagatgattggaggtggcatatgtatgacactgtt
aagggaagcgattggcttggtgaccaggattctattcaatatatgtgcagagaagcacca
aaagctgttatagagcttgagaactatggattgccattttcaagaaccgaagagggaaag
atataccaacgcgccttcggaggacagagcttagattttggaaaaggtggacaagcctac
cgttgtgcctgtgctgctgacagaacaggacatgctatgctacacacactttatggccaa
gcaatgaagcacaatactcagttttttgtggaatattttgcattagaccttatcatggac
aatgaaggcaactgtcagggagtcattgccttaaacatggaggatggcacccttcaccgt
ttccgtgcttctaatacaattctagccacaggaggttatggcagggcctatttctcagca
acctcagcacacacatgtactggagatggaaatgctatggttgcacgtgctggtttgcct
cttcaagatcttgagtttgtgcagttccatcctacaggcatttatggtgctggatgcctg
attactgaaggatcccgtggtgaaggtggtatccttagaaacagtgaaggtgaacggttc
atggaacgatatgctcctagtgcaaaagatcttgcttctcgtgatgttgtttcaagatcg
atgacaatggaaattagagaaggccgtggtgtagggccattgaaggaccacatttatttg
catctgaaccatctgccccctgaggttctgaaggaaaggcttcctggtatttctgaaact
gctgccatttttgctggtgttgatgtcaccaaggagccaattccagttttgcctaccgtg
cactataatatgggtggtatcccaacaaactaccatggggaggtagtggatatcaagggt
gataatccagatgctgttattcctggtctgttggctgctggtgaagctgcatgtgcatct
gtccatggtgcaaatcgtctaggcgcaaattcacttcttgacatagttgtttttggcaga
gcttgtgcaaacagggttgctgatatttctaagccaggtcagaagcagaaacctcttgaa
aaagatgctggagaaaagaccatagcctggttggacaaactgaggaatgccaatgggtca
ttgccaacttccaagatccgtctcaacatgcagcgtgttatgcaaaataatgctgctgta
ttccgtacacaagaaactcttgaagaaggttgtaagctgattagcaaaacatgggagagt
tttcatgatgtgaagctcagtgatcggagtctcatttggaactctgacttgatagagacc
attgagctggaaaatttgttgataaatgcatgcataactatgtattcagcggaggctcgg
aaggaaagcagaggagctcatgctcgtgaagatttcacgacaagagacgatgagaagtgg
atgaagcactcactggggtactgggagaacgagaaggttcgcttggcgtacaggccagtg
cacatgaacacattggacgacgaagtggagtcattcccaccaaaagcgcgtgtgtattga

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