Panicum virgatum (switchgrass): 120678729
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Entry
120678729 CDS
T07260
Name
(RefSeq) GDT1-like protein 5
KO
K23541
Ca2+/H+ antiporter, TMEM165/GDT1 family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120678729
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120678729
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Others
Others
120678729
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120678729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDT1
TauE
Mntp
DUF5993
PycTM
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
120678729
NCBI-ProteinID:
XP_039815980
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All DBs
Position
6N:complement(38840806..38845204)
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AA seq
232 aa
AA seq
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MAPSLLGGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRKLVLAGCLTALIVMTALSACLG
WSAPNLISRKWTHHVTTLLFFGFGIWSLWEGFKEDGDSEELAEVEAELDAAFKSNKGESK
NKSEANDDMKKQQRPFLMQFFSPIFIKAFSITFFGEWGDKSQIATIGLAADENPFGVVIG
GIIAQALCTTAAVLGGKSLATQISEKMVELSSGVLFLLFGIMSLLSGPEGEL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtctctgctcggggggttcaccaagtcgctggccatgacggtcctctccgag
atcggggacaagaccttcttcgccgccgcgatcctggccatgcgccatccaaggaagctc
gtcctggcaggctgtttgactgcattgatagtgatgacagctctatcagcctgtctgggt
tggtctgcaccaaatctgatatcacgtaaatggactcatcatgtgaccactcttctgttc
tttggatttggcatttggtcattgtgggaaggcttcaaagaagatggggactcggaagaa
ttggctgaagtggaagcagagctggatgctgcctttaagagtaacaaaggtgaatcaaaa
aataaatctgaggcaaacgatgatatgaagaaacagcaaagaccgtttttgatgcaattc
ttctcaccaatatttataaaggcattttctattacatttttcggcgagtggggtgacaag
agccagattgctactattggcttggctgctgatgaaaacccatttggcgttgtgatcggt
ggaatcatagcgcaagcactctgcactactgctgctgttcttggcggaaagagcctagcc
acacagatatctgagaagatggtggaactgtcaagtggagtactcttcctgctattcggc
atcatgtcattgctctcagggccagagggagaattgtaa
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