KEGG   Panicum virgatum (switchgrass): 120678748
Entry
120678748         CDS       T07260                                 
Name
(RefSeq) polyubiquitin
  KO
K08770  ubiquitin B/C
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120678748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120678748
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120678748
Ubiquitin system [BR:pvir04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120678748
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   120678748
  Exosomal proteins of other body fluids (saliva and urine)
   120678748
  Exosomal proteins of colorectal cancer cells
   120678748
  Exosomal proteins of bladder cancer cells
   120678748
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 TBK1_ULD Rad60-SLD_2 Dsc3_N DUF2604 Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 120678748
NCBI-ProteinID: XP_039815999
LinkDB
Position
6N:complement(39253508..39255864)
AA seq 305 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGQ
NT seq 918 nt   +upstreamnt  +downstreamnt
atgcagatctttgttaagaccctcaccggcaagaccatcacccttgaggtggagtcttct
gacaccattgataatgtcaaggccaagatccaggacaaagagggtatccccccggaccag
cagcggctcatcttcgctggcaagcagctcgaggacgggcgcacgcttgctgactacaac
atccagaaggagagcaccctccacctggtgctccgtctcaggggaggcatgcagattttc
gtgaagaccttgaccgggaagactatcaccctggaggttgagtcttctgacaccattgac
aatgtcaaggccaagatccaagataaggagggcatccccccagaccagcagaggctcatc
tttgctggcaagcagctcgaggacggccgtacccttgctgattacaacattcagaaggag
agcactctccacttggtgctccgactgaggggtgggatgcagatcttcgtcaagaccttg
actggcaagactattacccttgaggtggagtcttctgacaccattgacaatgtaaaggcg
aaaatccaggacaaggagggcatccctccggaccagcagaggctcatctttgctggcaag
cagcttgaggatggccgcacccttgctgattacaatatccagaaggagagcactctccac
ctggtgctccgcctgaggggtgggatgcaaatcttcgtcaagacattgactggcaagacc
atcaccttggaggttgagagttccgacaccattgacaatgtgaaggctaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatctttgcggggaagcagctggaggat
ggtcgcacccttgccgactacaatatccagaaggagtctaccctccacctggtcctccgt
ctccgtggtggtcagtaa

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