Panicum virgatum (switchgrass): 120678763
Help
Entry
120678763 CDS
T07260
Name
(RefSeq) RNA cytosine-C(5)-methyltransferase NSUN2-like isoform X1
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120678763
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
120678763
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120678763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
120678763
NCBI-ProteinID:
XP_039816026
LinkDB
All DBs
Position
6N:complement(44912107..44921710)
Genome browser
AA seq
831 aa
AA seq
DB search
MLASRTPVSLHHRIVAGGQRRRCIGGSERKPQGRHFTQALESLWRHSPRILPRPAAAAAT
GGDAKSSWQTPVVLENAAFEEYYKVQQIVHKEEWDAFMSVLRKPLPATFRINACCQFYKD
ICSKLENDFRRYLESEVSCEYGEDAIRPLPWYPGNLAWHLNFSRKELRKNQALESFHEFL
KHESEVGNITRQEAVSMVPPLFLNVQPDHHILDMCASPGSKTFQLLEMIHQSKEPGLLPG
ALVMANDLYVQRCDLLIHNTKRMCTANLIVTNHEAQNFPDCSLAKDYSEAYKDTCKPQGL
EFDRILCDVPCSGDGTIRKGHEMWRKWNSGMGNQLHLLQVNIAMRGIALLKVGGRMVYST
CSMNPVENEAVVAELLRRSGNSVELLDVSSELPELVRRPGLSTWKVQDRGCWFQTHDDVP
HDKKNVVLPSMFTSSNGTEGSHTVRGDVEVNIDDRSSLRNCNIEETSKNNHDMDGLPINT
NKKFDCTSNILNSKFPLHRCMRIVPHDQNSGAFFIAVLHKLSPLNGCQIQGTKIQHPLAK
GITAQPQKEPESETRLYKTSLTRQQNIVSKVVDSAEVLGRQQNLSMDNQTSNDNSTEVEM
VFNGVESSRAESGDSMRLQKQSRWKGVDPVLFFKDEVVIKSIISFFGIKESFPLRGHLVT
RSTDNARRIYYVSKSVKNILELNTEVGEQLKIVSLGIKMFESHRSKDCSSCAYRLSYEGL
SLLLPYISKRILYASPLDFHRLLQYRSINFAYFVDARFGEEAASLMPGCCVVVLLEGHKH
VDSICKDPSTVAIVCWRGKGTMNVMVSPPDRKDLLERMAYRFGLEACTEGD
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgttagcctcgaggacccccgtctcgctccaccaccgcatcgtcgccggcggccagcgg
aggcgatgtatcgggggaagcgaaaggaagccgcaggggcgccatttcacgcaggcgctc
gagagcctctggaggcacagcccccggatccttcctcgtccagccgctgccgccgctacc
ggcggtgatgccaaatcctcgtggcagacaccagtagtactcgagaacgctgccttcgag
gagtactataaggttcagcaaattgtccacaaggaggagtgggatgccttcatgagtgtc
ctacggaaaccgttgcctgcgactttcaggatcaacgcctgttgccagttttataaagat
atctgctcaaagttggaaaatgattttaggcgatatttggagagtgaggttagctgtgag
tatggagaagatgctatcaggcccctgccttggtatccaggcaatcttgcatggcatctg
aatttctctcggaaggaactgaggaaaaatcaggcacttgagagttttcatgagtttcta
aagcatgagagtgaggttggtaacataactaggcaagaggctgttagcatggttccacca
ttgtttctgaacgtacaacctgatcaccatattcttgatatgtgtgcttctccaggctct
aaaactttccagttactcgagatgattcaccaatcaaaagaaccaggactacttccagga
gcattggtgatggccaacgatctctatgtgcaaagatgtgatctccttatccataataca
aagagaatgtgcaccgccaacctaatagtaacaaaccatgaagcacaaaacttccccgat
tgttctcttgcaaaggattattcagaagcttataaggatacctgcaagccacaaggttta
gaattcgaccgcatactttgtgatgttccttgcagtggtgatgggactattcgcaagggt
catgaaatgtggagaaagtggaactcaggcatggggaaccaacttcatcttctgcaagtg
aatattgctatgcgtggtattgcattacttaaagtgggtggaaggatggtctattctacc
tgttcaatgaatcctgttgaaaatgaagctgttgtagcagagctccttcgaagaagtgga
aactctgttgaactccttgatgtttctagtgagcttcctgaattggtccggcgtcctggg
cttagcacttggaaggtacaagatcgcggatgttggtttcagactcatgatgatgttcca
catgataagaagaatgtagtattgccaagcatgtttacttcaagtaatggcactgaggga
agccatacagtgcgtggtgatgttgaagtgaatatagatgataggagcagcttaagaaat
tgcaacattgaagaaacaagcaaaaataatcatgatatggatggacttcctatcaatacc
aataaaaaatttgattgtacttctaacatactgaattcaaaattcccactgcatcggtgc
atgaggattgttcctcatgaccaaaacagtggggcatttttcatcgcagttcttcataaa
ttgtctcccttgaacggctgtcagatacagggcactaaaattcagcacccacttgcaaaa
ggcataactgcgcaacctcagaaagaacctgagtcagaaacaagactatataaaactagt
ttgacacgccaacagaacattgtttctaaagttgtcgattctgctgaagtgctgggtagg
caacagaatttaagcatggacaaccaaacatcaaatgataactcaactgaagttgaaatg
gttttcaatggtgtagaaagcagtcgagcagaatcaggcgacagcatgaggttgcaaaag
caaagtaggtggaaaggggtcgatcctgtattatttttcaaagatgaagtggtgataaag
agcataatatccttctttggcatcaaggaatcattcccactccgaggtcatctggtgact
agaagtactgataatgcaaggagaatatattatgtatcaaaatcggttaaaaatattttg
gagctgaatacagaagttggtgagcagcttaagatcgtttcgcttggtataaagatgttt
gaaagtcatagatcgaaggattgcagttcatgtgcatatagattgtcctacgaggggtta
tcactactgcttccatacatcagcaagaggatactatatgcatctccactggacttccac
cgacttttacagtacagaagcatcaactttgcttattttgttgacgctagatttggggag
gaagctgcatccttgatgcctggttgctgtgttgtagttttacttgaagggcataagcat
gtagattctatttgtaaggatccctccacagttgcaattgtttgctggagagggaagggg
actatgaatgtcatggtttctcctccggataggaaggatctgcttgaaaggatggcatat
cgctttggtcttgaagcctgtacggagggagattag
DBGET
integrated database retrieval system
