Panicum virgatum (switchgrass): 120678832
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Entry
120678832 CDS
T07260
Name
(RefSeq) bZIP transcription factor TRAB1-like isoform X1
KO
K14432
ABA responsive element binding factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120678832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120678832
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120678832
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
120678832
NCBI-ProteinID:
XP_039816156
LinkDB
All DBs
Position
6N:43938884..43943984
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AA seq
352 aa
AA seq
DB search
MDLKDGERRGAAGPGPLSRQGSIYSLTFDEFQSTLGGMGGGLGKDFGSMNMDELLRSIWT
AEESQAMASASAAAGAPGEDGAALQRQGSLTLPRTLSVKTVDEVWRDFVREGPPPGTAAG
AEPQPSRQPTLGEMTLEEFLVRAGVVRDNPAAAAMAAAVPAQPVAPRPIQAVSNGASIFF
GNFGAANDTGAGAMGFAPMGIGDQGMGNGLMPGVAGMASAAVTVSPVDTSVAQLDSVGKG
NGDLSSPMAPVPYPFEGVIRGRRSGAGVEKVVERRQRRMIKNRESAARSRARKQAYTMEL
EAEVQKLKELKAELQKKQEEMMEMQKNQVLEVVSNPYAQKKRCLRRTLTGPW
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaggacggcgagcggaggggggcggcggggccgggcccgctgtcgaggcag
gggtcgatctactcgctcacgttcgacgagttccagagcacgctcggcgggatgggggga
gggctcggcaaggacttcggctccatgaacatggacgagctgctgcggagcatctggacc
gccgaggagagccaggccatggcgtcggcctccgcggcggcgggggcgcccggcgaggac
ggcgccgcgctgcagaggcagggctccctcaccctgccgcgcacgctcagcgtcaagacg
gtggacgaggtctggcgggacttcgtccgggagggcccgccgccggggacggccgccggg
gcggagccgcagcccagccggcagccgaccctcggggagatgacgctcgaggagttcctc
gtccgggccggcgtcgtccgggacaaccccgccgccgcggcgatggcggcggcggtcccc
gcgcagccggtggctccgcggccgatccaggcggtcagcaatggcgcctccatctttttc
ggcaacttcggggccgccaatgacaccggggcgggcgcgatggggtttgcgccgatgggg
attggggatcagggcatgggcaacgggctcatgcctggggtggcggggatggcgagtgct
gccgtcactgtgagcccggtggatacgtcggtggcccagctggactccgtgggcaagggg
aacggggacctgtcctcacccatggcgccggtgccgtacccatttgagggagtgataagg
gggaggaggagcggtgcgggtgtggagaaggtggtggagcgccggcagaggaggatgatc
aagaacagggaatctgcagctagatcccgtgcccggaagcaggcatataccatggagttg
gaagctgaagttcagaaactcaaggaactgaaggcagagttgcagaagaagcaggaagaa
atgatggaaatgcagaaaaatcaggtcctggaagtggtcagcaatccatatgcacagaag
aaacgctgcctgcgaagaacattgacaggtccatggtaa
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