Panicum virgatum (switchgrass): 120678858
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Entry
120678858 CDS
T07260
Name
(RefSeq) thyroid adenoma-associated protein homolog
KO
K24169
thyroid adenoma-associated protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120678858
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
120678858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2428
TPR_Trm732_C
TPR_Trm732
Motif
Other DBs
NCBI-GeneID:
120678858
NCBI-ProteinID:
XP_039816199
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All DBs
Position
6N:complement(8145557..8154742)
Genome browser
AA seq
2167 aa
AA seq
DB search
MSAKWRSLQHQHRYTYTSIVFPKHYHEALALVPADITSSDFFLQLNNLISLTSTYSQVVA
VKDLASAYVQFLSAPGTSDDAVLAATKLYLEILFLENSLPLHRTLISVLAKCKKFSPVIS
VCFALLCEEYGGSGSKAKKRFLVSRAALSLIGYPKLGFLDEAVERCAAIMALDIVDGLDG
VTRDIGEGSRPSPVVMEQCQEAMSCMYYLLQRYPSKFTGLDKASSVFNSSVRTILSVLKS
SAFSRDCLVASGVSFCAAVQVFMSAEEISWFISQGLFGVCADHEDRKDLSVHDVLSDFNL
CEEIRDLSILSRLCLLRGILTSIPRTVLNIRQLDSSGSLWTVLYDGILPELCKHCENPID
SHFNFHALTVTQICLQQINTSVLTDSTDFSGDYKPFSRSVINRILRIIWRNLEDPLSQTV
KQVHLIFDLLLDIESCIPSEDHGLNNKLFLSNIANDLLCLGPRCKGRYVPLASLTKRLGA
KSLLSLKPNLLSETAYAYIDDDVCCAATTFLKSFLETLRDECWNDDGIDQGYDAFRVLCL
PPLMRGLVSGNSKLRSNLNTYALPALIEVDADSIFTMLGFISVGPSAKATEPDVVLKNDQ
CIAALVSLLKVSRNLALVEGDIDLDPDKLSVSQKEDNRGAAVISIRGINVTVPINWFALA
LTHSDESLRIDAAESLFLNPKTSSLPSSLELNLLKEAVPLNMCCSSTAFQMKWTSLFRKF
FARVRTALDRQVKQGSWIPSSTASIEGADSVDAAKVAVTQRAEDLFQFMKWLSSFLFNSC
YPSGPYERKTIAMELILTLLDVWPICHSEGKNNLYPYNDSIILPDSTISFVGSIIDSWDR
LRENSFRILLQFPTPLPGISSSLSINNVIRWAKTLVLSPRVRESDAGALTFRLIFRKYVL
ELGVSLVFSKESDCLECYTQSTDGDTEVVTSQNPVAQYISSLIQWLCTVVEEGEKDLSEA
CKKSFVHGVLLTLRYTFDELDWNSEVVQSCVSEMKCLVERLLQLIMHITSLALWVVSSDA
WYMPYDMDDVIDDGSFLSDIYEEDQRTTGTEKEEQNAKPGSNGKPADQVVMVGCWLAMKE
VSLLFGTIIRKVPLPGCSHSNSSQDGLLDSTEVTSMSEEILDVEQLEKMGDHFLQVLLKM
KHNGAIDKTRAGLTALCNRLLCSNDSRLCQMTESWMVLLMDRTIAKGQTVDDLLRRSAGI
PAAFIALFLAEPEGTPKKLLPRALEWLIEFAKASLAIFQKDSNQKSGIRKDGLGEPCESL
SGTAASAHSNGNLSKSRDEGVVPTVHVFNVLRAAFNDASLATDTSGFSAEATIVAIQAFS
SPYWEVRNAACLAYTALVRRMVGFLNVQKRESAQRSLTGLEFFHRYPALHPFLSSELKTA
TELLADGVSNNLESHIVKAIHPSLCPILILLSRLKPSPISCGTDDSLDPFLLLPFIQRCA
TQSNYRVRVLASRALIGLVSNERLQQVISDLLDNLASGNCEVVSHRVQFSDPPILANMQN
GNLHRASRSFSFNSIHGLLLQLSSLLDNNFRGLTDSCKKDHIIGQLIDVLSRCSWLGSTK
LCSCPVVSTSYLRVLDLMLDIARTGKSRHTEVIQTLLLELSSQCLSSAISTRYAFHDPTR
IELQQQATESFFSCFGLSKRNDETCEEDVQFQILGEPTSIISVMPREVSLPELHKEIMSC
LADPTYDVRITVLKRILRLTKSIRHGQRKNILHQRAGANLQPVLMERLFAEDHPRCLYYT
LKIIFLWNMESPFNNGEDSFTILSFWDRLVHLNNTMSHAKTREIILCCMGMCMKWFAKLL
RNALQMNGLKTSELSASFVRINEGNILSDALLRVNFFVTLVKNRSAPSETNNARRAAAEA
IVASGLLEEANLVASSVSNACFPFECDEGHIKEKCIEASVSEFTSLYACKIIDLWFICIK
LLEDEDAYLRQNLANNVQKIIANGSASAFCDDSTPLQVDRVIELSFDYLTSLFGHWLKYI
DCLLSIVLDTGNTLKSRGDLVRQIFDKEIDNHHEEKLLICQVCCFNIQKLLQSKCQTETG
GKNELFLQNWRESFLNQLTSLTSGYIEKEGKTDWIGGIGNHKDVFISVYADLLGLYVLAP
SGSLEQQDSPVTYLQEFSNLNGFITPFLKNPLISNLYVLVKLSHERFSSDKPENKVASNF
DPYFLIR
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaagtggcggtcgctgcagcatcagcaccggtacacctatacctcgattgtg
ttccccaagcactaccatgaggcattagcacttgtaccggctgatataacttcgtccgat
ttctttctgcaattgaacaacttgatctccttgacctccacctactctcaagtggttgcg
gtcaaagaccttgcctcggcatacgtgcagtttctgtctgctccagggacatctgatgat
gcagtgcttgccgccacaaaactttatctggaaatcctcttccttgagaactccctccct
ctccaccggacactcatatcggtccttgccaagtgcaagaaattctctccagttatcagt
gtgtgctttgccttgctctgtgaggaatatggtggctctggtagtaaggcaaagaagaga
tttttggtgtcccgggcagccttgtcactgattgggtacccaaagttgggatttttggat
gaggctgtagagaggtgtgcagcgatcatggcactggatattgttgatgggcttgatgga
gtgactagagacattggtgaagggtcacggccatctccagtcgtgatggagcagtgccag
gaggccatgtcttgcatgtactacttgctgcagcggtacccgtctaagtttactggcctt
gacaaagcatcaagtgtcttcaatagttctgttaggacaatactatccgttctcaagtca
tctgccttttcaagggattgcctggtggcctctggagtgagtttctgtgctgctgttcag
gttttcatgagcgcagaggagatttcctggtttatttctcaaggtctatttggtgtctgt
gcagatcatgaagatagaaaagatctatccgtgcatgatgtgctttctgactttaatctg
tgtgaagaaatcagagatctttccattttaagtagactttgtctgctaagagggattttg
acttctattccaaggacagtactcaacatacgccaacttgattccagtggatctttatgg
actgtattgtatgatgggattttacctgaactttgcaagcattgtgagaaccctattgat
agccatttcaatttccatgctcttacagtgacacaaatatgtttgcagcagataaatact
tctgttttaactgattccactgacttctctggagactataagcctttctcaagaagtgtt
atcaaccgtatattgagaatcatatggcgcaatctcgaagatcctttgagtcagacagta
aaacaggtgcatttgatctttgatctcctattagatattgaatcttgtattccatcagaa
gaccatggactcaacaacaaattgttcctaagcaatattgcaaatgatttactttgcttg
ggcccgcgatgtaaagggagatatgttcctttggcttctttgacaaagcgattgggtgcc
aaatctcttctaagtttgaaaccaaacctgctttcagaaactgcttatgcatacatagat
gatgatgtttgttgtgctgcgacaacatttttaaagtccttcctggagactttaagagat
gaatgctggaatgatgatggtatcgatcaagggtacgatgccttcagggttttgtgcttg
cctcctttgatgcggggacttgtatctggaaattcaaaactgcgttccaacttaaatact
tatgctctacctgctcttattgaagttgatgcagatagtatattcacaatgcttgggttc
atctcagttggcccgagtgcaaaggcaactgaaccagatgttgttttgaaaaatgatcag
tgtatagccgcactggtttcactgctcaaagtctctcgaaacctagctcttgttgaaggg
gacattgatttggatcctgataaattgtcagtgtctcagaaagaggataacaggggcgct
gcagttatatctattagagggattaatgttacagtgcctattaattggtttgcattggca
ctgacacacagtgatgaaagtctccgtatagatgctgctgaatctctctttctaaatccg
aagacatcaagtcttccctcctccttggaactgaacttgcttaaagaggcagtcccattg
aatatgtgttgtagctcaacagcatttcaaatgaaatggacaagtttatttcggaagttt
tttgctagggtacgaacagcccttgacagacaggtaaaacaggggtcatggattccatct
tcaaccgctagtattgaaggagctgactctgttgatgctgctaaggtcgctgttacccag
agggctgaagatctattccaattcatgaagtggctgagctcctttctgtttaactcttgt
tacccatctggcccttatgaaaggaaaacaattgcaatggagcttattcttacactatta
gatgtatggcctatttgccattctgaagggaagaacaatctttatccttacaatgacagc
ataatattgccagattcaacaatttcatttgtagggtctataattgatagctgggacagg
ctcagggaaaactcgtttcgcattctgctgcagtttccaacaccacttcctggaatttcc
tctagtctatccataaataatgttatcagatgggcaaaaacacttgtactaagcccacga
gtccgggaaagtgatgccggtgcgttaaccttccgtcttatatttaggaagtatgttttg
gagcttggagtcagtcttgtgttttctaaagagagtgattgccttgaatgttacacacaa
tctacggatggagatacagaagttgttactagtcaaaacccagttgcacagtatatctct
tcactcattcaatggctctgtactgttgttgaagagggtgagaaggatctttccgaagca
tgcaagaaaagctttgttcatggagttcttctcaccctgcgctacacattcgatgagctg
gattggaactctgaggtagtgcaatcgtgtgtttctgaaatgaaatgcctggtagaaagg
cttcttcagctcataatgcatataacttcgctggctctctgggttgtttcttctgatgca
tggtatatgccgtacgatatggatgatgtgattgatgatggttccttcctctcagatata
tatgaggaagatcaacgtactactggtacagaaaaagaagagcagaatgcaaaaccaggg
agtaatggcaaaccagccgatcaggttgttatggttggttgttggcttgctatgaaggag
gttagcctactttttggaaccatcatcaggaaagttcctttgcctggctgttctcattca
aattcatctcaggatggcttacttgacagtactgaggtgacaagcatgtcagaagaaatt
cttgatgtggagcagctagagaaaatgggtgaccattttttacaagttcttcttaaaatg
aagcataatggtgcaatagataagacaagggctgggcttactgccctttgcaatcgtctc
ctttgctcaaatgattcaaggctatgccaaatgacagaatcttggatggtgctactgatg
gataggacaattgccaaagggcaaactgtagatgatttgctaagaaggagtgcaggaata
cctgctgcatttatcgccctgttccttgcagagccagaaggaacaccaaagaagctactt
ccaagggcactagaatggttgatagaatttgctaaggcatctttagctatttttcagaaa
gatagcaaccagaagtctggaataaggaaagatggtcttggagagccatgtgaatcacta
tcaggaactgctgcaagtgctcattctaatgggaatctatctaaaagccgagatgagggc
gttgttcccacggtgcatgtgttcaatgtgcttagagctgcctttaatgatgcaagcttg
gcaaccgacacttctggtttcagtgctgaggcaacaatagttgcaattcaggcattttca
tctccctactgggaagtgcgcaatgcagcttgccttgcatacactgcactggttcgtcgc
atggttgggtttctgaatgtgcagaaacgtgaatcagcacaacgatcattaactggcctt
gaattcttccacaggtacccagcacttcatcctttcctttctagtgaactgaaaactgca
actgaactgctagctgatggagtttctaacaatttggagtcacatattgtgaaagccata
caccctagcctttgtccaattcttattcttctatcaaggctgaagccatcgcctataagt
tgtggaactgatgattctttagacccttttttgcttttgcctttcatccaaagatgtgct
acccagagtaactaccgggttcgtgtccttgcatcaagggcattaattggtttggtatct
aatgagagactgcagcaagttattagcgatctactggataatttggctagtggaaattgt
gaagtggtttcccacagagttcagttttctgaccctccaatattagctaatatgcaaaat
ggaaatttgcatcgggcttctaggtctttttcattcaattcaatccatggtcttttgttg
cagctgtcttctcttctggataacaactttagaggtctgacagacagttgcaagaaagat
catattattggccaactaattgatgttctctcaagatgttcttggcttggcagcaccaaa
ttatgctcttgccctgttgtaagtacatcttacttgcgggtattggatctcatgcttgat
attgcaaggacagggaaaagcagacatactgaagtcatccagacactactgttagagttg
agctcccagtgcttgagcagtgcaatatcaacccggtatgcattccatgatccaacccgg
attgaacttcaacagcaagcaactgaatcatttttcagctgttttggtctttcgaaaaga
aatgatgaaacttgtgaggaagatgttcagttccaaatacttggtgaacccacttcaatc
atttcagtgatgcctagggaggtctccctacctgaactacacaaggagattatgtcatgt
cttgctgatccgacatacgatgttagaattacagtgctgaagaggattcttcggctcaca
aaatcaatcagacatggccagaggaaaaacattttgcaccaacgggcaggagctaatctg
cagcctgtcttaatggaacggttatttgcggaagaccatcccaggtgcctttattatact
ctaaagattatatttttgtggaacatggaatccccattcaacaacggagaagattccttc
acaattttatccttctgggacagactagttcatttgaacaacaccatgtcacatgcaaaa
accagagaaataattctatgttgcatgggtatgtgcatgaaatggtttgctaaattactc
aggaatgctcttcaaatgaatgggcttaagactagtgagctctctgcatcatttgtcaga
atcaatgaagggaatatattgtctgatgccttgcttagagtaaacttctttgtcactctt
gtcaagaaccgaagtgcgccatcggaaactaataatgctcgacgtgctgctgctgaggca
attgttgcttcgggtcttcttgaagaagcgaacttagttgcttcatctgtgtccaacgcg
tgcttcccttttgaatgtgatgaagggcatatcaaagagaaatgcattgaagctagtgtt
tctgaatttacgagtctttatgcatgcaagattattgacttatggttcatatgcattaag
ttgttggaggatgaagatgcctatctgagacaaaaccttgcaaataatgtacaaaaaata
atcgcaaatggttcagctagtgccttctgtgacgattccacaccactgcaagttgataga
gttattgaattgagctttgactatcttacttccttgtttggccactggctgaaatacatc
gattgcttgttaagcatagtcttagatactggaaacactttgaagtcccgtggggatttg
gtccgtcagatatttgataaagaaatagataaccatcacgaggaaaagctgttgatatgt
caagtctgctgttttaatatacagaagcttttgcagtccaaatgtcagacggaaacagga
ggaaaaaatgaattgttcctgcagaattggcgggaaagctttttgaaccagctcacatca
ctgaccagtggctatattgagaaagaggggaaaactgattggattggcggcataggcaac
cataaggatgtgttcatatcagtttacgcagatctgttaggattatatgtgctcgcacca
tcaggttctctggaacaacaggacagtccggtgacttatttgcaagaattttcaaacctt
aatgggtttatcacacccttcctcaagaaccctctgatatctaacctttatgtgcttgta
aaactgtcacatgagaggttcagctcagataagccagagaacaaagtggcctcaaatttt
gacccatattttcttatcagatga
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