Panicum virgatum (switchgrass): 120678902
Help
Entry
120678902 CDS
T07260
Name
(RefSeq) probable WRKY transcription factor 2
KO
K18835
WRKY transcription factor 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120678902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120678902
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
WRKY
120678902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WRKY
Motif
Other DBs
NCBI-GeneID:
120678902
NCBI-ProteinID:
XP_039816280
LinkDB
All DBs
Position
6N:complement(45992382..45996770)
Genome browser
AA seq
689 aa
AA seq
DB search
MAGTDNRRALMEDWMLPSPSPRTLMSSFLNEEFSSGPFSSIFGDNSSNKPQDGIEKTKTL
VDLSVEETVQDTKAPLQLESNLFSTNQKSTSHGSLAERMAARAGFGVLKIDTSHVSSSAP
IRSPVTIPPGVSPRELLESPVFLPNAIAQPSPTTGKLPFLMPNNFKSMISSVPKKVEDQS
HDDCAFSFQTILRSKPPSFSTVDKGLGAFHQNQSLNDSQQELSLQVSTTATKDETEENLV
KPSTCDSMLDNDHPSPADEQVESEENQNGEDASVSVIAPDEDGYNWRKYGQKQVKNSEHP
RSYYKCTHPNCPVKKKVERSQEGHITEIVYKGSHSHPLPPPNRRPSVLSSHVIDLQADGS
ENFRSKPGHNTETSREMAPNDHFQDVHSVGLERNLSGSLTTTEIADTCVMESQEAVDVSP
TVSSNEKDDRATHGTIPLTYGRDEDETESKRRKMEVSATTNATTNAFDMATMASRAVREP
QIVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTYAGCSVRKHVERASNDLKSV
ITTYEGKHNHEVPAARNSSGQPNSSSSAAPQGSNLHQRPEPAQPSIPQLSAAAAYGSLCL
PSQLSAASGGFSFGMLPPGMAVPVPSLRTFMPASVPGQPPKMQGCAGLVLPRGEVKVNPE
EQSQLQVTNGNAMAAYQQFMGRLPQGPQM
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaccgacaaccgcagagcattgatggaggattggatgcttccttcacccagc
ccaagaacactgatgtcaagcttcttgaacgaagaattcagctctggtccattctccagc
atctttggtgacaacagcagtaacaaaccacaggatggaattgagaagaccaaaactttg
gttgatctaagcgttgaagaaactgttcaagatacaaaagcccctctgcagcttgaatca
aacctttttagcacaaatcagaaatcaacctcacatggaagtcttgcagagaggatggct
gccagggccggttttggagtcctgaaaattgacacatcccatgtcagttcttctgcgcca
attcggtctcctgtgacaataccaccaggtgtgagtccaagggagcttctggagtcacca
gtttttctacccaatgccattgcgcaaccttctcctacgaccggcaagttgccttttctg
atgcctaataactttaaatcaatgatatcctcggtacccaagaaggttgaagatcagtcg
catgatgattgtgcattttccttccagactattttgaggtctaagcccccaagtttttca
actgtggacaagggtttaggtgcatttcaccaaaaccagtccttaaatgatagtcagcag
gaattaagtctccaggttagcacaactgcaaccaaggatgaaactgaggaaaatcttgtt
aaacctagcacatgtgattccatgttagacaacgatcatccatcccctgctgatgaacag
gtagagagtgaggaaaaccaaaatggagaagatgcttccgtttcagttattgcgcctgat
gaggatggatataactggagaaaatatggacagaagcaagtgaagaatagtgagcaccca
aggagctactacaaatgcactcacccaaattgcccggtcaagaaaaaggtggagcgttct
caagagggtcatataacggagatagtctacaaaggttcccacagtcaccctttgccgcct
cccaaccgccggccaagtgtcctgtcatcacacgtcattgatttgcaagctgatggctct
gagaactttcgttccaaacctggtcataacacagaaacttcacgggaaatggctccaaat
gaccacttccaagatgtgcacagtgtaggtcttgaaagaaatctgtctggttctcttacc
acaacagagattgctgatacatgtgttatggagtcccaagaagctgtagatgtctcacca
acagtctcatccaatgaaaaagatgacagggcaacccatggtaccattcccttaacctat
ggtagggatgaagatgagactgaatctaaaagaaggaagatggaggtttctgccactact
aacgctaccaccaatgcctttgacatggcaactatggcatcaagagctgtccgggaacct
cagattgttgtgcagaccacaagtgaggttgacatccttgatgatggttaccgctggcgc
aagtatgggcagaaagttgtcaaaggaaatccaaacccgaggagctactataaatgcact
tacgcaggctgctccgtgcgcaagcatgtggagagagcctcaaatgatctcaagtccgtg
atcaccacctatgagggcaagcacaaccatgaagttccagctgccagaaacagcagtggg
caaccgaactccagttccagtgctgcgccacagggtagcaaccttcaccagaggccagaa
ccggcacaacccagcatcccacagttgagtgctgctgctgcctacggctcactttgtctc
ccatcgcaacttagcgcagcttcaggcggtttctccttcggaatgctcccgcctggcatg
gcggtaccagtaccatctctgagaaccttcatgccagcatctgtacctggccaacctcca
aaaatgcagggttgtgcagggcttgtcctgccaagaggtgaggtgaaggtgaacccagag
gagcagtcccaattgcaagtgacaaacgggaatgccatggcagcttaccagcagttcatg
ggcagattgcctcagggacctcagatgtaa
DBGET
integrated database retrieval system
