Panicum virgatum (switchgrass): 120678933
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Entry
120678933 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120678933
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120678933
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120678933
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120678933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
PARM
Motif
Other DBs
NCBI-GeneID:
120678933
NCBI-ProteinID:
XP_039816325
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All DBs
Position
6N:26777149..26783676
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AA seq
671 aa
AA seq
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MEECLQKGEAKTQTKHIEENQNSKMVRPRRRSVLLLLALTMLSPLALYTSRLPAALNPIQ
TRDFPGEIMNQGRGVKTDKLNALPLETVSSLKEPVSVVFSEELGGLSKESTESEGQELPS
RKAGEHKSRVLSEVTAAADGMEVIGQVTRREAQDGGLASAVSEKQVKTTGSQQQSSSEES
LLETMPKHTSAKVVAENSLTARTDGKTKSFVLPDMRIRNIKDQLIKAKVYVGLGSIRANS
QYLKDLRQRIREVQKVLGDASKDTDLPKNANEKVKALEQMLIKGRQMQDDCSIVVKKLRA
MLHSAEEQLHAHKKQAVFLTQLAAKTLPKGLHCLPLRLANEYFSLDPDRQQLPNQHKLTN
PKLYHYALFSDNILATAVVVNSTVLNAKHPSDHVFHIVTDRLNYAPMRMWFLSNPPGKAT
IEVQNIGEFTWLNDSYSPVLKQLGSQSMIDYYFGTNRANPDSNLKYRNPKYLSILNHLRF
YLPEIYPKLDKMVFLDDDIVVKKDLTGLWSINMKGKVNGAVETCGESFHRFDRYLNFSNP
VIAKNFDPHACGWAFGMNVFDLAEWKRQNITQIYHSWQKLNQDRSLWKLGTLPPGLITFW
NKTFPLSRSWHVLGLGYNPHVNSRDIERAAVIHYNGNMKPWLEIGLPKFRSYWSKYLDYD
QPFLRECNINP
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatgtttgcagaaaggggaagcgaaaacccagacaaaacacatcgaagaaaac
caaaactccaagatggtgaggccgaggaggaggtcggtgctcctgctcctcgccctcacg
atgctctcccccctcgcgctctacaccagccgcctcccggcggcgctcaaccccatccaa
acgcgggatttccccggagaaataatgaatcagggccgtggcgtcaagacagacaagctg
aatgcgcttcctctggaaactgtgagctctttgaaagaacctgtcagcgtcgtattctcg
gaggaactgggtgggttgtcgaaagaatcgactgaatctgagggccaagaattgccatcg
aggaaggcaggggagcacaagagccgcgtgctctctgaagtcacggctgctgctgatggc
atggaagtgatcgggcaagtgacgaggcgggaggcacaggatggtggcttggcaagtgcc
gtctcagaaaagcaggtgaaaaccaccggatcacagcagcaatcatcttcagaggaaagt
ttattggagactatgcctaaacatacatctgccaaggttgttgcggagaactccctaaca
gctagaacagatggtaaaactaaaagctttgttttgcctgatatgcggatccggaatatc
aaggatcagttaatcaaggcaaaagtctacgttggccttggatccattagagcaaattcc
cagtacctaaaagacttaaggcagaggatacgagaagtccaaaaggtgcttggtgatgca
tctaaggacactgatctaccaaagaatgcgaatgagaaggttaaagcactggagcagatg
ctgattaagggcagacagatgcaggatgattgttctattgttgtcaaaaagcttcgagct
atgcttcactcagcagaggagcagctgcatgcacacaagaagcaggctgtttttctgaca
caacttgcagctaaaacccttcctaaaggtcttcactgcctccccctgaggctagctaac
gaatacttctcattggatcctgatcggcagcagttgccaaaccaacataaactcactaac
ccaaagctgtatcattatgccttgttctctgataatatactagcaacagcagttgttgtt
aattcgacagtgttaaatgccaagcatccttcagatcatgtcttccacatagtaactgac
agactgaattatgctccaatgagaatgtggttcctttctaatcctcctggaaaggcaaca
attgaagtacagaacattggggagtttacatggctaaatgacagctacagtccagtgctc
aaacaacttgggtctcagtccatgattgattactactttggaacaaatcgtgcaaaccca
gattcaaatttgaaataccgaaatccaaaatatttgtcaatccttaatcatttgcgattt
tacttacctgagatttatccaaagcttgacaagatggtctttcttgatgatgatatagta
gtaaagaaggatctgactggcctctggtcaatcaatatgaaggggaaggtaaatggtgct
gttgagacttgtggagagagcttccatcgcttcgatcggtacctcaatttctcaaatcct
gttattgccaagaattttgacccccatgcttgtggttgggcttttgggatgaatgtgttt
gatctggctgaatggaaaaggcagaacataacccaaatttatcactcatggcagaagctt
aatcaagacagatcgctatggaaacttggcaccctccctccaggtttgatcacattctgg
aacaagacattccccctcagccggtcctggcatgttcttggtctaggttacaacccccat
gtaaacagcagagacattgaacgtgccgcagtcatacattacaatggcaacatgaagccc
tggctagagattggcctgcccaagttccgaagctactggtcgaagtatctggattatgac
caacctttcctgcgggaatgcaacatcaatccataa
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