Panicum virgatum (switchgrass): 120678945
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Entry
120678945 CDS
T07260
Name
(RefSeq) bifunctional purine biosynthesis protein PurH-like isoform X1
KO
K00602
phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:
2.1.2.3
3.5.4.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00230
Purine metabolism
pvir00670
One carbon pool by folate
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
120678945
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120678945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120678945
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.3 phosphoribosylaminoimidazolecarboxamide formyltransferase
120678945
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.10 IMP cyclohydrolase
120678945
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120678945
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Gene cluster
GFIT
Motif
Pfam:
AICARFT_IMPCHas
MGS
Motif
Other DBs
NCBI-GeneID:
120678945
NCBI-ProteinID:
XP_039816341
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Position
6N:11891676..11896941
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AA seq
611 aa
AA seq
DB search
MPLYLVSSPAAAAKLAAGPRARASPRRGRQTFFPARHCHVLSVHPLPTQSRRASLSSSAE
RAAGRAMAAVEAGASTAPEASLSATGVKQALISLSDKTDLANLGNGLQRLGFSIISTGGT
ASSLEAAGVNVTKVEEITHFPEMLDGRVKTLHPSIHGGILARRDQKHHLEALNKHGIGTF
DVVVVNLYPFYDKVTSGAITFEDGIENIDIGGPTLIRAAAKNHKDVLVVVDHKDYPALLE
YLDGKQDDQDFRRMLAWKAFQHVASYDSAVSEWLWKQSNKGDTFPPSFTVPLSLKSTLRY
GENPHQKAAFYGDKSLSLVNAGGIATAIQHHGKEMSYNNYLDADAAWNCVSEFESPTCVV
VKHTNPCGVASRQDILEAYRLAVKADPVSAFGGIVAFNTTIDEDLAREIREFRSPTDGEA
RMFYEIVVARGYTEKGLEVLKGKSKTLRILEAQQSGKGMLSLRQVNGGWLAQESDDLTPE
DITFTKMSERAPEGSELSDARFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRLESLRIA
FLKAGEEAKGAALASDAFFPFAWNDAVEEACRSGIAVIAEPGGSIRDQDAVDCCDKYGVS
LLFTGVRHFRH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccactctatctcgtctcctctcccgccgccgccgccaagctcgccgccgggccacgc
gcacgcgcgtcccctcgccgaggccgccagaccttcttcccagcacgccactgccacgta
ctctccgttcacccactccccacgcagagccgccgcgcctccctgtcttcctccgcggag
cgtgcggcggggcgcgccatggctgctgtggaggccggcgcgtcgacggcgccggaggcg
agcttgagcgccacaggagtgaagcaagcactgatttcattgtcagataaaacagacctg
gccaatcttggaaatggtcttcagcgcttggggttttctattatttccactggtggcacg
gcatcaagcttggaagcagctggagttaatgttacaaaagtggaggaaattacacatttt
cctgaaatgctagatgggagagtaaaaacattgcaccctagtatacatggtggtattctt
gcgcgaagagaccagaagcatcatctagaagcattgaacaagcatggcattgggacattt
gatgtggttgtagtgaacttgtatccattctatgataaggtcacctcaggtgcaataact
tttgaggatggtatagaaaatattgatatcggtggacctacattgatccgagctgcagcc
aagaaccataaggatgttcttgtcgttgttgatcataaagattatccagctctattggaa
tatctggatgggaagcaagatgaccaggatttccgcaggatgcttgcatggaaagctttc
caacatgttgcttcttacgattcagctgtctcagagtggttatggaagcaatcgaataaa
ggagatacatttcctcctagctttactgtgcccctgtcactgaagtctacacttagatat
ggtgaaaatcctcatcaaaaggctgcattctacggtgacaagagtctttctctagtaaat
gctggcggtattgcaacagcaattcagcaccatggaaaggaaatgtcgtataacaattac
ttggacgcagatgctgcatggaactgtgtctcggagtttgagagcccaacctgtgttgtg
gttaagcacacaaatccatgcggggtagcatcccgacaggacatccttgaagcatacagg
ttggctgtgaaggcagaccctgtgagcgcgttcggcggcatagtcgcctttaatacgacg
atcgatgaggatctcgcaagggaaattcgcgagtttaggagcccgacggatggcgaggcg
cggatgttctacgagatagttgtcgcacgcggatacactgagaaggggctcgaggtccta
aaggggaaatcgaagacgctgaggatactcgaggcgcagcagagcgggaaagggatgctg
tccctccggcaggtgaacggcggctggctggctcaggaatcggacgacctgaccccggaa
gacatcaccttcacgaagatgtcggagagggcccccgagggcagcgagctctcggacgcg
agattcgcctggctctgcgtcaagcatgtcaagagcaacgccatcgtgatcgccaagaac
aattgcatgctgggcatgggcagcgggcagccgaacaggctggagagcctgaggatcgcc
ttcctgaaggccggggaggaggccaagggagctgctctggccagcgacgccttcttcccg
ttcgcctggaacgatgctgtggaggaggcgtgccggagcggcatcgcggtgatcgcggag
cccggcggcagcatccgggaccaggacgccgtggactgctgcgacaagtacggggtgtcc
ctcctcttcaccggcgtcaggcacttcaggcactga
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