Panicum virgatum (switchgrass): 120678959
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Entry
120678959 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 35-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120678959
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120678959
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Gene cluster
GFIT
Motif
Pfam:
MatE
DUF6803
Motif
Other DBs
NCBI-GeneID:
120678959
NCBI-ProteinID:
XP_039816362
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Position
6N:complement(52911363..52913125)
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AA seq
488 aa
AA seq
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MMRAQPAEVDGDTPALRSAADAARMVWDESKRLWGIGLPIAVGTLSMYAISSVTQMFIGH
LGNLPLAAASIGLSVFATFALGFLLGMGSALETLCGQAFGAGQVAMLGVYLQRSWIILLA
TALLMSPLFVFAGPLLLLIGQDPEVAREAGRFALYILPSVFAMAINFPTAKFLQAQSKVT
VPAWIGLAALLAAALLNCLFVVALGWGLPGAAAAYDLAHWGIALGQTAYIIGWCGDGWKG
WSAAAFHGIWAFVRLSLESAVMLCLEVWYMGLITVLTGDLQDAQIAVDSLGICMNVNGWE
GMIFIGLNAAISVRVSNELGSGRPRAAWNAVVVVVAEALLIGVLCMVLVLVFRDSFSVIF
TSDDALRRAVSRIAGLLGLTMVLNSVQPVISGVAVGGGWQGLVAYINLGCYYVFGLPLGY
MLGYRLNFGVGGIWSGMLCGVALQTLILLAVVWRTDWKAEAAQASSRVQKWGGKGTDDDE
QVNKPLLE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgggcgcagccggcggaggtggacggcgacacgccggcgctgcggtccgccgcg
gacgccgcgcgcatggtgtgggacgagtcgaagcgcctgtggggcatcggcctccccatc
gccgtgggcacactcagcatgtacgccatcagctccgtgacccagatgttcatcggccac
ctcggcaacctccccctcgccgccgcctccatcggcctctccgtcttcgccaccttcgcg
ctcggcttcctcctcggcatgggcagcgcgctcgagacgctctgcggccaggccttcggc
gccggccaggtcgccatgctcggcgtctacctccagcgctcctggatcatcctcctcgcc
accgcgctgctcatgtcgccgctcttcgtcttcgccggcccgctgctcctgctcatcggc
caggacccggaggtcgcgcgggaggccggcaggttcgcgctctacatcctcccctccgtc
ttcgccatggccatcaacttccccaccgccaagttcctccaggcgcagagcaaggtcacg
gtgcccgcctggatcggcctcgccgccctgctcgccgccgcgctcctcaactgcctcttc
gtcgtcgccctcggctggggcctccccggcgcggccgccgcctacgacctcgcgcactgg
ggcatcgcgctggggcagaccgcctacatcatcggctggtgcggggacggctggaagggc
tggtccgccgccgccttccacggcatctgggccttcgtgcgcctctcgctcgagtccgcc
gtcatgctctgcctcgaggtgtggtacatgggcctcatcaccgtgctcaccggcgacctc
caggacgcgcagatcgccgtcgactccctgggcatatgcatgaacgtcaacggatgggag
gggatgatcttcatcggcctcaacgcggccatcagcgtccgggtctccaacgagctcggg
tccggccggcccagggccgcctggaacgccgtcgtggtcgtcgtcgcggaggcgctgctc
atcggcgtcctctgcatggtgctcgtgctcgtcttcagggacagcttctccgtcatcttc
accagcgacgacgccctgcggcgcgccgtctccaggatcgccggcctgctggggctcacc
atggtgctcaacagcgtgcagccggtgatctcaggggtggcggtcgggggtggatggcag
gggctcgtcgcctacatcaacctcggctgctactacgtcttcgggctgcccctgggctac
atgctcggctaccgcctaaactttggagttggggggatttggtccggcatgctctgtggt
gttgccctccagacgctcatcttgctagccgtggtctggagaacagattggaaagcagag
gccgcccaagcttcaagccgtgtgcaaaagtggggcggcaagggcactgatgatgatgaa
caagtcaacaagcctctcctagaatga
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