Panicum virgatum (switchgrass): 120678991
Help
Entry
120678991 CDS
T07260
Name
(RefSeq) SAC3 family protein C-like
KO
K23719
nuclear mRNA export protein SAC3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120678991
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
120678991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Baculo_LEF-11
Motif
Other DBs
NCBI-GeneID:
120678991
NCBI-ProteinID:
XP_039816410
LinkDB
All DBs
Position
6N:complement(47762227..47766179)
Genome browser
AA seq
418 aa
AA seq
DB search
MDRGSSSSRGRGWQGRGHHGGGRGGGGWQGYGRGRHGGGGGGRGRSSPPTPSSTAYRAAV
NPTPAPACTVDDAAPIVGTCPDMCPARERAQRERLRDLAVLERVGGDPTRTSSSLAVKKF
CRTISSTNVMASDIRPLPVLRETMDYLLHLLDSSEHPFETIHDFIFDRTRSIRQDLSMQN
VVNHQAIQIYEDVVTFHIRSHQRLARSCQDSDASSLCFLNMEQLTKCLLSLFDMYHAIHE
SDSHSKREAEYYSFYVLLHLGCKIPKMVDSLSLWYSQLPPQVRQSKEMLLARNLLRCYHL
GNFKRFFCMIAAEATDLQLRLVEPFLNEVRARALMYFNHSGYKLQHHPLEHLSEILMIEE
SELETLCRICGLEIRTSEGMKAFVPKQTSFSLPTSMPQSNGIYISRDEKSIVIQVNGL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaccggggctcgagctcctcccgtggcagaggctggcaaggacggggacaccacggt
ggcggtcgtggtggcggaggctggcaaggatatggacgcggacgccatggtggcggaggg
ggtggcagaggccgctcctccccaccaactccttcctccaccgcctaccgtgcggcggtc
aacccaactccggcaccggcctgtaccgtggacgacgcagcgccgattgtgggaacctgc
cctgacatgtgccctgcgagggaacgagcgcagagggaacggctgagggacctggccgtg
cttgagcgggtgggcggtgatcccacacggacgtcttcttccctcgccgtcaaaaagttc
tgcagaactatatcttccacaaatgtaatggcttcagatatacgtcctctgccggttttg
cgagaaacaatggattatcttttgcatttattggattcttcagagcatccgtttgagaca
atccatgattttatctttgatagaacaaggtctataagacaagacctcagtatgcagaat
gtagtgaatcatcaagcaattcaaatatatgaggacgtggtaacatttcatattaggtcc
catcaaagacttgctaggtcttgtcaggattcagatgcatcttcattgtgtttcctaaac
atggagcaactaacaaaatgcctgctttctctgtttgatatgtatcatgcaatccatgag
agtgattcccacagcaaaagagaggccgaatattattccttctatgtgcttctacatttg
ggctgcaagataccgaaaatggtagattcactctctttgtggtatagccaattacctcct
caagttagacagtcaaaggaaatgttattggcgagaaatttattaagatgctaccaccta
ggaaacttcaagcgcttcttttgcatgatagcagctgaagcaacagatcttcagttgcgc
cttgttgagccgtttctcaatgaggtccgagctagagccttaatgtacttcaaccatagc
ggctacaaactccaacaccaccctttggagcatttgtcagaaatcctgatgatcgaggag
tcggaactggaaactctctgcagaatatgtggacttgaaatcaggacaagcgaaggtatg
aaagcttttgtgcctaaacagacaagcttcagcctaccgacatccatgccccaaagtaac
ggcatttacatctcaagggatgaaaagagcattgtaattcaggttaatggattgtag
DBGET
integrated database retrieval system
