Panicum virgatum (switchgrass): 120678995
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Entry
120678995 CDS
T07260
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a-like isoform X1
KO
K14972
PAX-interacting protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120678995
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
120678995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15_C
Motif
Other DBs
NCBI-GeneID:
120678995
NCBI-ProteinID:
XP_039816412
LinkDB
All DBs
Position
6N:complement(53052613..53063309)
Genome browser
AA seq
1312 aa
AA seq
DB search
MDGAANWRPTQGADPAAGGVDPNAAAPAGGDWRTQLQPEARSRIVNKIMETLKKHLPVSV
PEGLSELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMESQTKTQQNAGNAQVIPNQNP
PGTAPGLPPQGSNPAQSSAIPLMSQQQTRQPNASTSVQGSLPSLGQSLSGVSQTSTLQNM
SGMPQNTMNNGLAQGTPQDMYAAQRQLAGRQQQQQQQQQAQNQLIYQQQKMLMNQKLQQN
ALMQPHIQQQQSLLQSTQLQSSQQAMMQMSSGLQPGQSTISQTQPMAMQSATQSGIQQNP
LNSVQQSVQSLLQQPTPSVMRQQQHPQSSMHQQPSLQQTQPTQQSNIPLQQQQPQLMGQQ
SNLQQNQLISQQNGAGLPVQSNNLLNMQQTQQMLNQQSMPLHQPQQLAPQGNMSSLHQQQ
QQNQQQQLLGTAPNVSSMQRMHMSNKAIQQPQQQHHAQQASMGLMQPQSQQNQLQQSQQH
MMSQFQSQPNQLQQQLGMQQRLQTSASMLLQQNNIDQKQYIQAPRGLQEVSSSTSVDSTA
QTGHPGAGDLQEELYQMIKNLKDQYFAELNDLYNKISMKIQHVDNHMPAQKSSDQYEKMK
NFKASLERTLHFLQLNKSSIQPGLREKIPIYEKQIVNILNFQRRKPVQAQGQQQFQQSVG
QAPSSNISQQQQASGLQQHDSHANQMPQASLPSMSTGVQSSGAPGIQHVPAPQATNFGVP
TTQQNVTNALQAGSNLESAQGNNFNHVQHGSMGSALQQGSTGPMQGAMNAQQQSSSNLLS
NNAMSTMQPNTNSMQQNASSLQQLKQQQQEHQIMQSQQIKRQQIIQHLQQQKQIHQSQLP
MQQQLQKQQQQGQMQVSQLHSGNDLNELKVRQGPAMKSGMYLGQRNYYQQMKQNSAFPIS
SPQNLQASSPQISHHSPQVDQHNLLQSQLKTGTPLHSANSPFVPSPSPPVAPSPIPVDSD
KPLSNLSSLTSTGQAGHQQTSLPPQTQSIAVNTPGISASPLLAEFTSVDGSQANVPTQVP
TKSSAAERPLDRLLKALRTTQRQSLTAAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLV
AMTKCRLQARNFISHDGSGTSKKMKRDTSAMPLNVSSPGSINDSLKQSYSVETPELQSTA
TSRVKCQKAEVNHALMEEIQEINQQLIDTELHVSEDDAESFAATSEGAEGTVIRCTFTAV
AVSPSLKSMFASAQMSPILPLRLLVPASYPKCSPVLLDKFPDEQSRNSDDLSTKAKSKFG
ILLRGLAEPMSLREIARTWDACARKVISEYAQQTGGGSFSSSYGCWESCVGA
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgccgccaactggcgccccacgcagggggccgaccctgccgccggtggcgtc
gaccctaacgccgccgctcccgccggaggcgactggcgcacccagctccagcccgaggcg
cgaagcaggatcgtcaataagataatggagactctgaagaagcatctgccagtatcagtg
cctgaggggctgagtgagcttcaaaaaattgctgtgcgttttgaagagaaaatctatact
gcagccaccaaccagtctgattatctgcggaagatttctctgaaaatgctgtctatggag
agtcagacaaagacacaacagaacgctggaaatgctcaagtgattccaaatcaaaacccc
ccaggtacagcacctggccttcctccacaaggcagtaatccagcacagtcatcagctatc
ccgttgatgtctcagcaacagacacggcaaccaaatgcttctacatctgttcaaggttct
ctccctagtcttggtcagagcttgtcgggtgtcagccagacatccacgctgcagaacatg
tctggcatgccacaaaacaccatgaacaatggtttggcacagggtactccacaagatatg
tatgctgcacaaagacaattggcaggtaggcagcagcagcagcagcagcagcagcaagca
cagaatcagttaatttatcagcagcaaaaaatgttgatgaaccagaaattgcagcagaac
gcactcatgcaaccacacattcagcagcagcaatctttattgcagtcaacacagctgcaa
tcttcacagcaggccatgatgcagatgtcatctggccttcagcctgggcagtccaccatt
tcacaaacgcagcccatggctatgcagtccgctacgcagagtggtattcaacagaatcct
ttgaactcagtacaacaatctgtgcagtcattactccagcagcctacaccatctgtaatg
aggcagcagcaacatccacagtcctccatgcatcagcagccttctttgcagcaaactcag
ccaactcaacagtccaacattcctttgcaacaacagcaaccacaattaatgggtcaacag
tcaaatttgcaacaaaatcagttaatcagtcaacagaatggtgctgggctaccagttcag
tcaaataatcttttgaatatgcaacagacgcagcagatgttgaaccagcaatcaatgccc
ttgcaccagcctcaacaattggccccccagggaaatatgtcaagtctgcatcagcagcag
cagcaaaaccagcagcagcagcttcttggaactgcgccaaatgtttctagcatgcaacga
atgcatatgtcaaataaggcaattcagcaaccacagcagcaacaccatgctcagcaggca
tcgatgggtttgatgcaacctcagtctcagcagaaccagcttcagcaatctcaacaacat
atgatgtcacagttccagtctcagcctaatcaactgcaacaacaattgggaatgcaacag
agacttcaaacttcagctagcatgcttttacaacaaaataacattgatcaaaagcaatat
attcaggctccgaggggccttcaagaagtttcatccagtacatctgtggattccactgct
caaactggtcatccaggtgcaggtgatttgcaagaggagctatatcaaatgattaagaac
ttaaaagaccagtactttgcagaactcaatgatttgtacaataaaatatctatgaagata
caacatgttgataaccacatgccagctcaaaagtcatcagaccagtatgaaaagatgaag
aacttcaaagcatcgttggagcgcacattgcacttcctgcaacttaacaagagcagcatt
cagccaggtttgagggaaaaaattccaatatatgagaagcaaattgtcaatatcctgaat
tttcaaagaaggaagcctgtgcaggcacaaggacaacaacagtttcagcaatctgttggg
caagctcctagctctaacatttcacagcaacaacaggcttcaggtttgcagcagcatgat
agtcatgctaatcagatgcctcaagcaagtttgcctagcatgagcacaggagtacagtcc
tctggtgcacctggcatccagcatgtacctgcgcctcaagcgacaaactttggtgttcca
acaactcagcaaaatgtcacaaatgcactgcaggctggctctaatttggagagcgcccaa
ggaaataattttaatcatgtgcagcatggttcaatgggttctgcattgcaacagggaagc
actggtcccatgcagggtgcaatgaatgcacagcagcagtccagtagtaacttgttatcc
aacaatgcgatgagtacaatgcaacctaataccaattccatgcaacaaaacgcaagctca
ttgcagcagctaaagcagcaacaacaggagcatcagattatgcaaagtcagcaaataaag
cgtcagcagattatacaacacttacagcaacaaaagcaaattcatcaatcacagctacca
atgcagcaacaattgcagaaacaacagcagcaagggcagatgcaggtctcacagcttcat
tctggaaatgatttgaacgagctaaaggttaggcaaggacctgcaatgaaatctggaatg
tacctgggtcaacgcaactattatcagcagatgaaacagaatagtgcctttccaatttct
tctccacaaaacctccaagcatcatccccacaaatctcacaccattctcctcaggttgat
cagcacaatctgttgcagtctcaactcaagaccggaacaccactgcattcagctaactca
ccatttgttccatctccatccccacctgttgccccatctcctataccagtggattcagat
aaaccactctccaacttatcatcacttactagtactgggcaggctggacatcagcaaact
tcccttccacctcaaacacaatcaatagccgttaacacaccaggcatatctgcgtcaccc
ttgctagcagaattcacaagtgtcgatggaagtcaggctaatgtacctactcaagttcca
accaaatcaagcgcagcagaaaggcccctcgaccgcttgcttaaagctttgcgaacaaca
cagcgccaatcccttactgctgcagttagcgatataggttctgtcgtgagtatgattgat
aggatcgctggatcagcacctggtaacggttctagagctgctgttggtgaagatcttgtc
gctatgacaaaatgccgcttgcaagccaggaacttcataagccatgatgggagcggtaca
tcaaagaaaatgaagagggacactagtgctatgcctcttaatgtgtcatcgcctggaagc
atcaatgatagcttgaagcaatcatatagtgtggagactcctgagctgcaatcaactgca
acctcacgtgtcaagtgtcaaaaggctgaggtgaaccatgctctaatggaggagattcag
gagataaaccaacagctcatagacacagagctccatgtctccgaggatgatgctgagtca
ttcgctgctacatctgagggggctgaagggacagtcattagatgcacgttcactgctgtt
gctgttagccccagcttgaaatccatgtttgcttcggcacagatgagcccgattctgcca
ttgaggttgcttgttcctgctagctaccccaaatgctccccggtgctcttagacaagttt
ccggatgaacagagcaggaactcggacgacctgtctacaaaggccaagtcaaagttcggc
atattgctccgtggtctagcggagcccatgtcactgcgagaaatcgcaaggacatgggat
gcctgcgcccgcaaagtgatctccgagtatgcccagcagactggtggaggcagtttcagc
tcgagctacggttgctgggaaagctgcgtaggcgcttga
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integrated database retrieval system
