Panicum virgatum (switchgrass): 120679007
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Entry
120679007 CDS
T07260
Name
(RefSeq) protein DNA-DAMAGE INDUCIBLE 1-like isoform X1
KO
K11885
DNA damage-inducible protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120679007
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120679007
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Asp_protease
gag-asp_proteas
ubiquitin
Asp_protease_2
UBA
Rad60-SLD
RVP_2
UBA_7
RVP
UBA_3
Ddi2_HDD
Motif
Other DBs
NCBI-GeneID:
120679007
NCBI-ProteinID:
XP_039816457
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Position
1K:8430748..8437111
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AA seq
411 aa
AA seq
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MKVTVMTADEQILSLDVDPDESVENLKALLEVETRVPLRQQQLHFNGKEMQNSEKLSSIG
VQDGDLVMMLPSNERASQDVVKLNPDGTAANPQAFQQHVRGDSQLMAQLLQSDPQLAQAI
LGDSINELQNILRSRHQQRMELKRKQEEELALLYADPFDVEAQKKIEAAIRQKGIDENWE
AALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYRG
VAVGVGQSEILGRIHVAPIKIGHLFYPCSFTVLDAPNMEFLFGLDMLRKHQCMIDLKDNV
LRVGGGEVSVPFLQEKDIPAHIRDEEKLSKLASSPGQATGESSKAREGTPDLPQRTPTAG
APVANPPQQGGDFEAKVTKLVELGFDRASVVQALKLFNGNEEQAAAFLFGG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcacggtgatgaccgccgacgagcagattctctccctcgacgtagaccccgac
gaatccgtggagaatctaaaggcgcttctcgaggtggagactcgtgtcccattgcggcag
cagcagcttcacttcaatgggaaggagatgcagaactcagagaagctcagctccattggg
gtccaggatggtgatcttgtcatgatgctcccctcaaatgaaagggcctctcaggatgtt
gtaaagttaaatcctgatggaactgctgctaatcctcaagcttttcaacagcatgttcga
ggtgattcacaacttatggcacagctccttcagagtgatccgcaactagcacaagctatt
cttggagacagcatcaatgaactacagaatatactacgctcccgccaccaacagagaatg
gaattgaaacgcaaacaagaagaagagcttgctttattgtatgccgatccttttgatgtc
gaagctcagaagaaaattgaagctgcaattcggcagaaaggcattgatgaaaattgggag
gctgccctagagcacaatcctgaagcatttgctcgagtggtaatgctgtatgtggatatg
gaggtcaatggggtacccttgaaggcctttgtcgacagtggagcacagtcaactatcata
tcaaaaagttgtgctgaacgttgcgggttgttgaggcttcttgatcagcggtaccgaggg
gttgctgttggagttggtcaatcagagatactgggaagaatacatgtcgctccaataaag
attgggcatctcttctatccttgttctttcactgtattggatgcccccaatatggaattc
ctatttgggcttgatatgctgcgaaaacatcagtgcatgattgacctaaaggacaatgtt
cttagagtgggaggtggtgaggtttcagtgcccttcttacaagagaaagacatccctgca
catatacgagatgaagagaaattatctaagttagcatcttctcccggccaagcaactgga
gaatcatcaaaggcacgtgaggggactcctgatttaccgcaacgaactcctactgcagga
gctccagttgcgaatcctccacagcagggaggagatttcgaagcaaaagtcacgaagctc
gtagaacttggatttgaccgagcatctgtagtacaagcactcaagctgtttaacgggaat
gaggagcaggctgctgcgttcctctttggtggttag
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