Panicum virgatum (switchgrass): 120679011
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Entry
120679011 CDS
T07260
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase FKBP62-like isoform X1
KO
K09571
FK506-binding protein 4/5 [EC:
5.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120679011
Enzymes [BR:
pvir01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120679011
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
FKBP
120679011
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FKBP_C
TPR_2
BSP_II
TPR_1
DDHD
PPP4R2
Motif
Other DBs
NCBI-GeneID:
120679011
NCBI-ProteinID:
XP_039816427
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Position
6N:complement(19854015..19917255)
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AA seq
701 aa
AA seq
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MVLHAIMFPQQSKNENVVSSEISEVLSPGDFMKTIVRHGDGSYLPQKGVGVEVHLTATSS
DGCQFFSTRQGENNPSSFVLGAVEGGGEEEEEEEEEEEEEEEEEEEEEDNDSGGGADYDI
KKEYNDDGDGNIGHEEEENEEEDEEEEEEEEEEEEEEEEEDTIDKGEIAALLHTAIGTMR
IGERAVFTIAFSSPSDENGNSGTAASVDSVQYDIELLTVFQDLHGDGGVIMKLTSGGCDW
SVSSWKVQPRESDCYVTVKYEARLTNGTLITKSDGIEFAVEDGHFCPAMSTAVLFLRERQ
KAKLTVEPKYAFGDEGRPAGKADDGEVPPDATIEVNLELLFISFVFGVGHDETTRVRTLR
RGHGRECAGEDSLVQVRLIGRLQDGTVFVNKGHNGTKTYEIKTSQDQVVDGLDEAITHMT
EGTVYLVTVPPDHAFGSEGSQQQLAFVPANATVTFEVELVSIISKRKHFGNMETKECINT
AWKKKEEGDELVRFKQYKQASKRYDKAVEMISLQLPFDERFIYTIEEIEAYLYIKDEIEA
GRAQQIPVSQIDAWGEFNFQYAIEEIDKYEELRMLIIPSNLRNAECQMELENYQKAAQLC
TEVLILDSKHTEAQCIRSQAYSLLSDNRLTELDIMSTLEDLGLNRAPENDLGRRLWLFNR
YRYYRLYGSKSFMGGCKPTRKYSEQRSLRTKDILDDYATMI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggtgctccacgccattatgttcccccaacagtccaagaacgaaaacgtggtcagctca
gagatttcagaagtactttcaccgggagatttcatgaagacaatagttagacatggtgac
ggttcctatttaccacagaaaggcgttggagtggaagttcatcttacggcaacttcctca
gatggatgccagtttttttcaaccaggcagggagaaaataatccttcgagttttgttctt
ggagctgtggaaggaggaggagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagataatgatagtggtggtggtgctgattatgacata
aagaaagaatataatgacgatggggacggcaacataggtcatgaagaagaagaaaacgag
gaggaggacgaggaggaggaggaggaagaagaagaagaagaagaagaagaagaagaagaa
gacactatcgacaaaggtgagattgccgccctactgcacacagctattgggacaatgagg
atcggtgagagagccgtgttcaccatcgcattctcctcacccagcgatgaaaatggtaac
tctggtacagctgcgtcagttgattcggttcaatacgatatcgagctgttaactgttttt
caagaccttcacggggatggaggcgtaataatgaagttgacttctggaggttgcgattgg
agcgtaagtagttggaaggttcagccaagggagtcagactgctatgtaactgtaaaatat
gaagctcggctaactaatggaacattaataactaaatctgatggaatcgaatttgctgtc
gaggatggtcacttctgcccggcaatgtcaactgctgtgttatttctgagggagagacag
aaagcaaaattaactgtcgagccaaaatatgcatttggtgatgaaggaagaccagcagga
aaagctgatgatggcgaagtgccaccggatgcaactattgaagtcaaccttgaattgctc
tttatcagctttgttttcggcgttggtcacgatgagacgacacgagtcagaacgctaaga
agagggcacgggagagaatgtgccggcgaggactcgttagtacaagttcgactgatcgga
agactacaagatgggactgtttttgtgaataaaggacataacggaacaaaaacctatgaa
atcaagacaagccaagaccaagttgtagatggacttgatgaagctataacgcacatgact
gaagggaccgtttatttggtgacggtacctccagatcatgcattcggctctgaaggatca
cagcagcagttagcatttgttcccgcaaatgctactgtaacatttgaagtggagctagta
tccattatctcaaaaaggaagcattttggcaacatggaaacgaaggaatgtatcaacacc
gcttggaagaaaaaagaggagggtgatgagttggtcaggttcaaacaatacaaacaggcc
tcgaagagatatgataaggctgtagagatgatttcgctacagcttccgtttgatgaaaga
ttcatatacacgatagaagaaattgaagcatatctatacataaaagacgaaattgaagcg
ggaagagcgcaacaaattccagtatctcagatagatgcttggggcgaattcaactttcag
tatgcaattgaagaaatagacaaatacgaggaactcagaatgctaattattccttcaaat
ctccgtaatgctgaatgccaaatggaacttgaaaactaccagaaggcagctcaactttgc
accgaggtattgatacttgatagcaagcacaccgaagcacaatgtatccgatcccaagcc
tactccctgctgtcggacaaccgtttgacagagctggatatcatgagtaccctggaggac
ttggggttgaatcgtgctcctgaaaacgatctggggcgacggctgtggctattcaaccgg
tacaggtactaccgactgtacggatcaaagagtttcatgggaggatgcaagccaacgagg
aaatattcagaacagagaagcctaagaacgaaagacatcttagatgactatgctacaatg
atatga
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