Panicum virgatum (switchgrass): 120679021
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Entry
120679021 CDS
T07260
Name
(RefSeq) transaldolase-like
KO
K00616
transaldolase [EC:
2.2.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pvir_M00007
Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120679021
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120679021
Enzymes [BR:
pvir01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.2 transaldolase
120679021
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Motif
Pfam:
TAL_FSA
DUF7443
Motif
Other DBs
NCBI-GeneID:
120679021
NCBI-ProteinID:
XP_039816444
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Position
6N:complement(5943475..5948349)
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AA seq
396 aa
AA seq
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MALSISTPTSSSLLPASRQVGRWSPLARSAKPVSFSLWRSPLAARSAAGNARASPVDEVV
TELDAVAGFSEIVPDTVVFDDFERFAPTAATVSSSLLLGISGLPDTKFKSAIDTALADGE
CNTLEKPEDRMSCYLTKALANVGAGLAQQVPGCVSTEIDARLAYDTQGIIQRVHELLNLY
NQHDVSTDRLLFKIPATWQGIEASRLLESDGIQTHLTFVYSFAQAAAAAQTGASVVQIFV
GRLRDWARNHSGDPEIDEALKKGEDAGLALAKKVYAYIHRNGYKTKLMAAAIRNKQDVFS
LLGIDYIIAPLKVLQSLEESVTDPDVKYSYVPRLTPAIGKTYEFTEEELLKWDQLSLAAA
MGPAAEELLASGLEGYANQARRVEELFGKIWPPPNV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccatctccacgcctacctcctcctccctccttccggcttcccgtcaggtg
ggcaggtggagtccattggcgcggtcggctaagcctgtgtctttcagcctctggaggtcg
cctctggcggcgcggtccgccgccggcaacgcacgagcttcccccgtcgacgaggtcgtc
actgagctcgacgcggtggccggattcagcgagatcgtgccggacactgtcgtgttcgat
gatttcgagaggttcgcacccacagcggccacggtgagctcctcgctgctgcttggaatc
tctgggctcccggataccaagttcaagagtgcgatagatactgcactggcagatggtgag
tgcaacacattggagaagcccgaggacaggatgtcctgttacctcaccaaggccctggca
aacgttggtgctggactggctcagcaagtccctggatgcgtttcgactgaaatagatgct
cggttggcttatgacacccagggcattatccagagggtgcatgaactgttgaatctatac
aaccaacatgatgtctcaactgaccgcctgctatttaaaattcctgctacatggcaaggt
atagaggcctcaaggttgcttgaatctgatggaattcagacacatttaacatttgtgtac
agtttcgcacaagcggcggcggcagcacaaactggtgcatctgttgtgcagatatttgtg
gggcgattgcgggattgggcaaggaatcactctggtgacccagagatagatgaagctttg
aagaagggagaagatgctggccttgctttggcgaagaaagtatatgcctatattcacaga
aatgggtataaaacaaagttgatggctgctgccatacggaacaagcaggacgtgttcagc
cttcttgggattgattacatcattgcacctctgaaggtactgcagtctctggaagaatct
gtcactgatcctgatgtgaagtacagttatgtcccaaggttgactcctgctattgggaag
acatacgagttcactgaagaggagcttttgaagtgggaccagttgagtcttgcagctgcg
atggggccagccgctgaagaactgcttgcttcaggattggagggatatgcgaaccaagca
cggcgtgttgaggagctcttcgggaagatctggccacctccaaatgtttaa
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