Panicum virgatum (switchgrass): 120679043
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Entry
120679043 CDS
T07260
Name
(RefSeq) MYB-like transcription factor ODO1
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120679043
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120679043
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120679043
NCBI-ProteinID:
XP_039816467
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Position
2K:43988547..43993699
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AA seq
279 aa
AA seq
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MGRQPCCDKVGLKKGPWTAEEDQKLVSFLLNNGQCCWRAVPKLAGLLRCGKSCRLRWTNY
LRPDLKRGMLSEEEEKTVIELHAELGNRWSNIASHLPGRTDNEIKNHWNTHIKKKLRKMG
IDPATHKPLQPAPPPLPQDPAGSPEAEKIVVTAVTPGHEAFCTDDVPMAHLLDDIVFPGD
VAAPSDGVTTAYSLDQSSSGSSSSYSASAAASSSGGGSVDGEWPDLPPMMMDWPESMWQL
EDVVTGRTPWEFEDPFLTYQTTALFDHQETWTNSMIELF
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcaaccgtgctgcgacaaggtggggttgaagaaggggccgtggacggcggag
gaggaccagaagctcgtcagcttcctcctcaacaacggccagtgctgctggcgcgccgtg
ccaaagctcgccggattgctgcggtgtgggaagagctgccggctgcggtggaccaactac
ctgcggccggacctgaagcgcgggatgctatcggaggaggaggagaagacggtgatcgaa
ctgcacgcggagctgggcaaccggtggtccaatatcgcgtcgcacctgccggggaggacg
gacaacgagatcaagaaccactggaacacccacatcaagaagaagctcaggaagatgggc
atcgaccccgccacccacaagcccctccagcccgctcctcctcctcttcctcaggatcca
gccggctcgccggaggcagagaagatcgtcgtcacggcagtcacgccaggacacgaggcg
ttctgcaccgacgacgtgcccatggcgcacctcctggacgacatcgtgtttccaggtgac
gtggccgctcccagcgacggcgtcaccacggcttactcgcttgaccagtcttcctccggc
tcatcgtcgtcctactccgcctcggcggcagcgtcgagcagtggcggcggcagcgtcgac
ggtgagtggcctgatttgccgccgatgatgatggactggccggagtcgatgtggcagctg
gaggacgtggtaacggggcgaacgccatgggagttcgaggaccccttcctgacgtaccag
acgaccgcgctgttcgatcatcaggaaacttggaccaacagcatgatcgagctcttctga
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