Panicum virgatum (switchgrass): 120679129
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Entry
120679129 CDS
T07260
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 6-like
KO
K19893
glucan endo-1,3-beta-glucosidase 5/6 [EC:
3.2.1.39
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120679129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
120679129
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
120679129
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
Enzymes
120679129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
120679129
NCBI-ProteinID:
XP_039816586
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All DBs
Position
6N:complement(12872566..12876837)
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AA seq
488 aa
AA seq
DB search
MAAAAAAVRAAAVTVLSVAVLCGAGLRRSQAIGVNWGTQLSHPLPASTVVRLLQDNGFDK
VKLFDAEHAILGALKGSGIQVMVGIPNDMLADLAAGGKAAEDWVAKNVSGHVRDGVDIRY
VAVGNEPFLETFNGTYLNTTFPAMQNIQAALVKAGLADKVKVTVPLNADVYQSPTGKPSD
GDFRADIHGLMLAIVQFLASTGAPFVANVYPFISLYADPNFPLDYAFFQGSSSPVVDGGV
TYQNTFDANHDTLVAALRRNGFGNVSVVVGEVGWPTDGDANANLDYARRFNQGFLAHIAG
GQGTPLRPGPVDAYLFSLIDEDRKSIQPGNFERHWGIFNYDGTPKYALSLAGGNGSATLK
PARGVRYLEKRWCVLKPSADLADQKVGDSVSYACGLADCAALGYKTSCAGLDAKGNVSYA
FNSYYQTMDQDDRACDFRGLAAATSVDPSVGTCRFIVEIDVGAAAAISSARGVASVLAAL
VLMSSMLL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggccgtgcgcgccgcggcggtgacggtgctgtcagtggcggtg
ctgtgcggcgcgggcctccggcggtcgcaggcgatcggcgtgaactggggcacgcagctg
agccacccgctgccggcgagcacggtggtgcggctgctgcaggacaacggcttcgacaag
gtgaagctgttcgacgccgagcacgccatcctcggcgcgctcaagggctcgggcatccag
gtcatggtcggcatccccaacgacatgctcgccgacctcgccgccggcggcaaggccgcc
gaggactgggtcgccaagaacgtctccggccacgtccgcgacggcgtcgacatcaggtac
gtggccgtcggtaacgagccgttcctggagacgttcaacgggacgtacctgaacacgacg
ttcccggcgatgcagaacatccaggcggcgctggtgaaggccggcctggctgacaaggtg
aaggtgacggtgccgctgaacgccgacgtgtaccagtcgccgacggggaagccgtcggac
ggcgacttccgcgccgacatccacggcctgatgctcgccatcgtccagttcctggcgtcc
accggcgcgccgttcgtggccaacgtgtacccgttcatcagcctgtacgcggaccccaac
ttccctctcgactacgccttcttccagggctcctcgtcgccggtggtcgacggcggcgtc
acctaccagaacaccttcgacgccaaccacgacacgctggtagcggcgctccgccggaac
gggttcggcaacgtgtcggtggtggtcggcgaggtcgggtggccgacggacggcgacgcc
aacgccaacctcgactacgcgcggcggttcaaccaggggttcctcgcccacatcgccggc
ggccagggcacgccgctgcggccgggccccgtcgacgcctacctcttcagcctcatcgac
gaggaccgcaagagcatccagccgggcaacttcgagcgccactggggcatcttcaactac
gacggcacgcccaagtacgcgctcagcctcgccggcggcaacggctcggcgacgctcaag
ccggcgaggggcgtcaggtacctggagaagaggtggtgcgtgctcaagccgtcggcggac
ctcgccgaccagaaggtcggcgacagcgtcagctacgcgtgcgggctcgccgactgcgcg
gcgctggggtacaagacctcctgcgccggcctcgacgccaagggcaacgtctcctacgcc
ttcaacagctactaccagaccatggaccaggacgaccgcgcctgcgacttcaggggcctc
gccgccgccacctcggtcgacccctcggtggggacgtgccgcttcatcgtcgagatcgac
gtcggcgccgccgcggctattagctccgccaggggcgtcgcctctgtgctcgccgcgctc
gtgctcatgtcgtccatgttgctctga
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