Panicum virgatum (switchgrass): 120679134
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Entry
120679134 CDS
T07260
Name
(RefSeq) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ-like
KO
K02372
3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
4.2.1.59
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00780
Biotin metabolism
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir01240
Biosynthesis of cofactors
Module
pvir_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120679134
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
120679134
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120679134
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
120679134
Lipid biosynthesis proteins [BR:
pvir01004
]
Fatty acid synthase
Component type
120679134
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Gene cluster
GFIT
Motif
Pfam:
FabA
MaoC_dehydratas
MaoC_dehydrat_N
4HBT
Motif
Other DBs
NCBI-GeneID:
120679134
NCBI-ProteinID:
XP_039816589
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All DBs
Position
6N:complement(12941588..12944025)
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AA seq
222 aa
AA seq
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MEAAAVPRSAAVCRAAPAVPAARALPLPLPLPRRARSASVAAPRRLVLAARRAADGDSVE
TAPEAVPIEKRFPAFPSVMDINQIREILPHRFPFLLVDRVIEYKAGEYAVGIKNVTINDN
FFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRDNFFFAGIDKVRFRKPVIAGDT
LIMRMTLTKYQKRFGLAKMEGKAYVGGDLVCEGEFLLVSATE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgccgccgtgcccagatccgccgccgtctgccgcgccgcgccggcggtcccg
gccgcgcgcgccctgcccctgcccctgcccctgccccgccgcgcgcgctccgcgtccgtc
gcggcgccgcgccgcctcgtcctcgccgcgcgccgcgccgccgacggcgacagcgtggag
acggcgccggaggcggtccccatcgagaaaaggttcccggccttccccagcgtcatggac
atcaaccagatccgcgagatcctcccccacaggtttccattccttttggttgatagagta
attgaatacaaggctggagaatatgcagtggggatcaagaatgttacaataaatgataac
ttcttcccaggacatttccctgaacgccccataatgcctggtgttctcatggttgaggcc
atggcccaggttgggggtctggtgatgctgcaacctgaagttggtggatctcgagacaac
ttcttttttgcagggatcgacaaagttaggttccgcaagccagtgattgctggggacaca
ttgatcatgagaatgactctgacaaagtaccagaagagatttggactcgcaaagatggaa
ggaaaagcttatgttggtggtgacctagtttgtgagggggagttcctcctggtcagtgca
actgaatag
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