Panicum virgatum (switchgrass): 120679144
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Entry
120679144 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 2-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120679144
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120679144
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GFIT
Motif
Pfam:
BACK_BPM_SPOP
MATH_2
BTB
MATH
Motif
Other DBs
NCBI-GeneID:
120679144
NCBI-ProteinID:
XP_039816596
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All DBs
Position
6N:complement(13576093..13577777)
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AA seq
356 aa
AA seq
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MGSESKRTSSSHTTEAETGTHSFKIVGYSLKKGFGFRKSIQSGTFTVGGYDWAIQFYPDG
VNDLTKGYTAVYLVLVSKKVEVRASYVLSLVNQITGLPENLFSETTTRVFSDANLFSPRT
PIARRSKLESKSAGYIVDDCLTIECTVTVVKESWVETTSGFEIEVPPSDISQHFGKLLSD
EEEADVTFSVGGETFPAYKIVLATRSPVFKAQLYGQMKERRARRLTVEGIQPDVFKVLLQ
FIYTDSLPEWDDLDAEEYCEISRHLLAAADRYAMDRLKLLCASNLVDHLDAETVAITLAL
ADQHNCDCLKDVCIEFMASSDKMYAVLETEGYANLKRTCPSILVDVLEKNSRYRKA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgaatccaagcggacatcgtcgagccacaccactgaggcggagacgggcacg
cactcgttcaagattgttgggtacagtctcaagaagggcttcggtttccgcaaatctatc
cagtcgggcaccttcaccgtcggcggttacgactgggccatccaattctaccccgacgga
gtgaacgaccttaccaaagggtacacggcagtctatctggtgcttgtgagcaagaaagtt
gaggtgcgagcgtcctatgtcctgagtttggttaaccagattacagggttgccagaaaac
ctgttttctgaaaccaccactagagtgttcagcgatgcaaatttattcagcccaaggacc
cccatagccaggagaagtaagctggagagtaaatcagctggctacatagttgacgattgc
ctgacaattgaatgtactgtcacggtcgtcaaagaatcgtgggtggaaaccacatctggc
tttgagatcgaagtaccaccctcggacatatcacagcattttggcaagttgttgtcggat
gaagaggaagctgatgtcacattcagtgttggaggtgagactttccccgcgtacaagatc
gtgctggccacacggtcccctgtcttcaaggcgcagctgtatggacagatgaaggagagg
agggcccggcgtttgactgttgaaggcattcagcctgatgtctttaaggtcctgctgcaa
ttcatctacacggattcactgcctgaatgggatgatcttgatgctgaggaatattgtgag
atttccaggcatttacttgcggctgcagatagatatgccatggacaggttgaagttgttg
tgtgcaagcaatcttgttgaccatcttgatgcggaaactgtggcaattacactggccttg
gctgatcagcataactgcgactgtctcaaggatgtttgcatcgaatttatggcctcttca
gataagatgtacgctgtgttggaaacagagggttatgccaatctcaaaagaacttgccct
tctatcctagtagatgtactggagaagaatagcaggtatcgcaaggcataa
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