Panicum virgatum (switchgrass): 120679259
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Entry
120679259 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120679259
KO
K08770
ubiquitin C
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120679259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120679259
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120679259
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
120679259
NCBI-ProteinID:
XP_039816738
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Position
6N:complement(9416848..9418251)
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AA seq
289 aa
AA seq
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MGTITCELESSYAATAGAGKVKLDGKFGVPPPEHGWFAFAGTGKGRRLGDGGRFLRRRTS
GGGGGGGMQVFVRTLGGRSLALDVSPSDTVDVVKARVQARERVAAADQRLVFAGRELSDG
RRTLAEYGVGKEANLFLHRRLRGGAGGSRRATTTAAGVLATVVAVGAALAYFPVPAAAAA
AAGGGGMTLSLAFLLLAWALAMAGVNLITAGVLLIGRAGTVRCTVQSVEHSKVFSFVRRN
LAMLGVAAASSAGTGVVVSAGNRALCFVSFVLFLVAMSLVTIGVASCAR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccatcacgtgcgagctggaatcgtcgtacgccgccacggccggcgccggcaag
gtcaagctagacggcaagttcggcgtcccgccgcccgagcatggctggttcgccttcgcc
ggcaccggcaagggcaggcggctcggggacggcggccggttccttcgtcgtagaaccagc
ggcggcggcggcggcggcggcatgcaggtcttcgtgaggaccctgggcgggaggagcctg
gccctggacgtgagcccgtccgacaccgtcgacgtggtgaaggccagggtccaggcgagg
gagcgcgtcgcggcggcggaccagcgcctcgtcttcgccgggagggagctcagcgacggc
cgccgcaccctcgccgagtacggcgtcgggaaggaggccaacctgttcctccaccgccgc
ctccgcggcggcgccggcggctcgcgccgggcaacgacgacggccgccggcgtcctcgct
accgtggtcgcggtcggcgcggcgctcgcctacttcccggtcccagctgctgcggcggcg
gcggcaggcggcggcggcatgaccctgtccctcgccttcctcctcctcgcgtgggcgctc
gccatggccggagtgaacctgatcacggccggcgtcttgctgatcggcagagccgggact
gtccggtgcaccgtgcagtccgtcgagcacagcaaggttttctcctttgtccgtcggaac
ctcgccatgcttggggttgcggctgcctcgtcggcggggacaggagtcgtcgtcagcgcc
ggtaaccgggcactctgtttcgttagctttgttctgttcctggtcgccatgtctctcgtt
accatcggcgtagcgagctgtgctcgctga
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