Panicum virgatum (switchgrass): 120679307
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Entry
120679307 CDS
T07260
Name
(RefSeq) U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1
KO
K14561
U3 small nucleolar ribonucleoprotein protein IMP4
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120679307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120679307
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120679307
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Gene cluster
GFIT
Motif
Pfam:
Brix
Motif
Other DBs
NCBI-GeneID:
120679307
NCBI-ProteinID:
XP_039816794
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Position
6N:complement(6036294..6042312)
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AA seq
296 aa
AA seq
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MIRRNQRMRREYLYTKSLEGTERALFEKKRRIRQALEEGKPIPTELRNEEHELRRQIDLE
DQERQGAAVPKSFVDNEYATGTIREPKILLTTSRDPSAPLIQFVKELKVVFPNSQRINRG
GQVLSAIVESCRSHDITDLILVHEHRGQPDGLVISHLPQGPTAYFGLLNVVTRHDIKDRK
TMGKMSEAYPHLILDNFSTKIGERTATILKHLFPVPKPDSKRIITFANRDDYISFRHHVY
EKPGGPKSIDLKEVGPRFEMRLYKLTLGTMEQNEAPCEFELRPYINTAKKQRTLGA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgattcggcggaaccagaggatgcggcgggagtacctgtacaccaagagcctggagggc
accgagcgggcgctgttcgagaagaagcgccgcatccggcaggcgctcgaggagggcaag
cccatccccaccgagctccgcaacgaggagcacgagctgcggaggcagatcgacctcgag
gaccaggagcgtcaaggtgccgcagttccaaagagcttcgttgataatgagtacgcgact
ggcacgattcgggagcccaagatactcttgaccacgtctcgcgatcccagcgcccccctg
attcagtttgttaaggagctgaaggttgtctttcccaactcacaaagaattaaccgtggt
ggccaggtcttatcagctattgttgagtcttgccggtcgcatgatattactgatcttatt
ttggtccatgaacatcgcggtcaacctgatggtttggtcatctctcatctaccacaaggt
ccaactgcatactttggattactcaatgtggtaacaaggcatgacatcaaggacaggaag
acaatgggcaaaatgtcagaagcttacccccatttaatacttgacaacttctcaaccaag
attggtgaaaggactgctactattctgaagcacctctttcctgtgccaaagccagattct
aagcgaataattacttttgctaatagggatgactacatttctttcaggcatcacgtctac
gagaaaccaggcggccccaagtctatcgacctgaaagaggttggcccccgatttgagatg
cggctgtacaagctcacactaggaactatggaacaaaacgaagcgccatgtgagtttgag
ctgcgcccctacatcaacactgccaagaaacaaaggactcttggcgcatga
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