Panicum virgatum (switchgrass): 120679331
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Entry
120679331 CDS
T07260
Name
(RefSeq) probable NEDD8-conjugating enzyme Ubc12-like
KO
K10579
ubiquitin-conjugating enzyme E2 M [EC:
2.3.2.34
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120679331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120679331
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.34 E2 NEDD8-conjugating enzyme
120679331
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
120679331
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
RWD
UEV
Motif
Other DBs
NCBI-GeneID:
120679331
NCBI-ProteinID:
XP_039816837
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All DBs
Position
6N:complement(32257843..32266153)
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AA seq
183 aa
AA seq
DB search
MINLFKIKGQKKDDAATANGKPAARKQSPGELRLHKDIAELNLPKTTKISFPNGKDDLMN
FEATIKPDEGYYVGGKFLFTFQVPPAYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDW
KPVLNINTIVYGLNLLFSQPNDEDPLNHEAAAVLRDDPKKFEKNVHRAMAGGYVGEIHFP
RCM
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgataaatctttttaagattaagggccagaagaaggatgatgcagcgactgcaaatgga
aaacctgctgccaggaagcaaagtccaggggagctgcgtctccataaagatattgctgaa
ctcaaccttcccaagaccaccaagatctcttttccgaatggcaaggatgatctgatgaac
tttgaggccactattaagcccgatgaaggatactacgtgggtggtaaatttcttttcacc
ttccaagttcctccagcttaccctcatgaacctcccaaagtcaagtgcaagactaaggtt
taccatcccaatattgacttggagggaaatgtctgcctgaacattctgcgtgaagattgg
aagcctgtcctgaacatcaacaccattgtgtatggtttgaatcttctattctcgcaacct
aatgatgaggaccccctgaaccatgaagcagcagctgttcttcgtgatgacccgaagaag
tttgagaaaaatgtccacagggcgatggctgggggttatgttggtgaaatccacttccct
aggtgtatgtaa
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