Panicum virgatum (switchgrass): 120679362
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Entry
120679362 CDS
T07260
Name
(RefSeq) myosin-11-like isoform X1
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120679362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120679362
04131 Membrane trafficking [BR:
pvir04131
]
120679362
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120679362
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120679362
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120679362
mRNA cycle factors
P-body specific factors
120679362
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120679362
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120679362
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120679362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_16
AAA_22
CbiA
AAA_19
Flp1_like
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120679362
NCBI-ProteinID:
XP_039816871
LinkDB
All DBs
Position
6N:22828090..22838774
Genome browser
AA seq
1530 aa
AA seq
DB search
MGTKVNIIVGSHVWAEDPAICWVDGEVVKINGEEAEIQATNGKKIVANLSKLYPKDMEAA
AGGVDDMTKLSYLHEPGVLQNLSTRYELNEIYTYTGNILIAVNPFQRLPHLYDPHMMQQY
KGAPFGELSPHVFAVADVAYRAMINENKSNAILVSGESGAGKTETTKMLMRYLAYLGGRA
ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYLLCAAPQEEVEKYKLGSPKTFHYLNQSNCYELVGVSDAHEYL
ATRRAMDIVGISTQEQDAIFRVVAAILHIGNIEFSKGKEVDSSVLKDEKSKFHLETTAEL
LMCNPGALEDALCKRVMVTPEEVIKRSLDPYNATVSRDGLAKTIYSRLFDWLVDKINSSI
GQDASSKCLIGVLDIYGFESFKSNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEQID
WSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFQRHKRFVKPKL
SRTDFTICHYAGEVLYQSDQFLDKNKDYVVAEHQELLSASKCSFISGLFPPLPEETSKSS
KFSSIGARFKQQLQALMDTLNSTEPHYIRCVKPNNVLKPAIFENVNVMQQLRCGGVLEAI
RISCAGYPTRRTFYEFLHRFGILAPEALEGNSSDEKAACKKILEKKGLAGFQIGKTKVFL
RAGQMAELDARRTEVLSAAAKTIQGKMRTHIMRKKFLSLRKASVCVQAIWRGRLACKQYD
NMRREAAAIKVQKNQRRHQARRSYKLQYASVLVVQTALRAMAARNEFRFKKQSKAAVTIQ
ARYRCHRAHSYHRKFKCAAIVAQCRWRGRIARKELKKLKMEARETGALKEAKDKLEKKVE
ELTWRVQLEKRLRTDLEEAKAQELSKLQSSMETLQAKLEEANTMLVKEREAAKTIVEAPP
VVQETQVVIQDTEKIDSLTTEVQELKISLQSEKQRADDLEKKCSEEERANEEKQKRLEET
EIKMRQFQDYLRRLEEKLANVESENKVLRQQAVSMAPSKILSGRSKSNLQRSSENVQVSS
NDPKIILESNNTSSPKKEYDIDDKPQKSLNEKQQENQDLLIRCIAQHLGYAGNRPVAACI
IYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNEVLAYWLSNASTLLLLLQRTLKAS
GSTGMAPQRRRSSSATLFGRMTQSFRGTPQGVNLSLINGSMVSGVETLRQVEAKYPALLF
KQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLMKGSSRSNTNTAAQQALIA
HWQGIVKSLGNFLNILKVNNVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KAGLAELEHWCYRATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQ
QLYRISTMYWDDKYGTHSVSPEVISNMRVLMTEDSNNPVSNSFLLDDDSSIPFSVDDISK
SMQQIDISDIEPPPLIRENSGFVFLLPPPE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggggactaaagttaatataattgtgggctctcatgtgtgggctgaggaccctgctatc
tgctgggtcgatggagaggtggttaaaatcaatggcgaagaggcggagatccaagcaacc
aatgggaaaaagatcgttgcaaatttgtcaaaactatatcccaaagatatggaagcagct
gctggtggagttgatgacatgacaaaactttcctatctccatgaaccaggagtgctgcag
aatttgtcgaccagatatgagcttaatgaaatctatacatacactggcaatattctcatt
gctgtcaatcctttccaaagattgccccatttatatgatccccatatgatgcaacagtat
aagggagcaccatttggagaattaagtccacatgtttttgctgtggcagatgttgcatac
agggcgatgattaatgaaaataagagcaacgccattcttgtgagtggtgagagtggtgct
ggaaaaacagagacaacaaaaatgcttatgaggtatcttgcctatttgggtggccgagct
gcaactgaaggaagaacagtagagcaacaagttcttgaatcaaatccagttcttgaagct
tttggcaatgcaaaaactgtcagaaataataattctagtcgatttggtaagttcgtcgag
attcagtttgataagcatgggagaatatcaggtgctgcgatcagaacataccttcttgaa
aggtcacgtgtatgccaaatatctgacccagagcgcaattaccactgcttttatctcctt
tgcgcagcacctcaggaggaggttgaaaagtacaaattgggaagtcccaagacttttcat
tatctcaatcaatcaaattgttatgagttggttggagtaagcgatgcccacgaatatttg
gcgaccagaagagcaatggatattgttggcatcagtactcaagaacaagatgctattttt
agggttgttgctgctatccttcatattggcaatattgaattttccaaggggaaagaagtt
gattcgtcagtcttgaaagatgaaaaatcaaagtttcatcttgaaacaactgctgagctt
cttatgtgtaatcctggagccctggaagatgcactttgtaagcgtgtcatggtaacacca
gaagaggttataaaaaggagtcttgatccttacaatgctactgttagcagggatggcctg
gcaaagacaatatattctcgcttgtttgactggcttgttgataaaatcaatagttccatt
gggcaagatgctagctctaaatgtcttattggtgtcctggacatctatggttttgagagc
ttcaagtcaaacagttttgagcaattctgtattaattatacaaatgagaagttgcaacaa
catttcaatcagcacgttttcaagatggaacaagaggagtacactaaagaacaaattgat
tggagctacattgaatttgttgataatcaagatgttcttgaccttattgagaagaagcct
gggggtgtgattgcacttcttgatgaggcatgtatgtttcccaagtcaacacacgagacg
tttgcccagaagctttaccagacttttcaaagacacaaacgttttgtcaaaccaaagcta
tctcgcactgactttacaatctgccactatgctggagaggtgttgtaccagtctgatcaa
ttccttgacaaaaataaagactatgttgtggcagagcaccaggaactgctaagtgcttct
aaatgctcattcatctctggattatttccacctcttccagaggagacatctaaatcttcc
aagttctcttccattggagcacgctttaagcaacaacttcaagcccttatggatacattg
aattctacagaacctcattatattagatgcgtgaagccaaataatgtgctaaaaccagca
atttttgagaatgttaatgtcatgcaacagttgcgttgtggtggtgtacttgaggcaatc
agaattagctgtgccgggtatcctacacgtcgcacattttatgagtttttgcatcgattt
ggaatacttgcaccagaggccctcgaaggaaatagtagcgacgaaaaggctgcatgcaag
aagattttggaaaagaaggggcttgcgggctttcagatagggaaaacaaaagttttcctg
agagccggtcagatggctgaattagatgctaggaggactgaagtactcagtgctgcggca
aaaacaatccaggggaagatgcggacacatataatgcggaagaagttcctttccttgagg
aaggcatctgtatgtgttcaggcaatatggagaggaagactggcttgtaaacaatatgat
aacatgcgaagggaagcagctgccatcaaagttcagaaaaatcaacgtaggcatcaggca
agaaggtcctacaaactacaatatgcttccgttcttgttgtgcaaactgcattgcgagca
atggcagcaagaaatgagttcagatttaagaagcaatctaaggcagcagttacgattcag
gctcgttataggtgccacagggctcattcctaccataggaagtttaaatgtgcagccatt
gttgcacaatgcagatggagggggagaattgcaaggaaagaactcaagaaactcaaaatg
gaagcaagagaaacaggtgccctcaaagaagcaaaggacaaacttgaaaagaaagtagaa
gaacttacatggcgcgtacagttagagaaacggttaaggactgacctggaagaagcaaaa
gctcaggagttgtcaaaattgcagagctctatggaaacgttgcaagctaaattggaggag
gcaaatacaatgcttgtcaaggaacgggaagctgctaagactattgtagaggcacctcct
gtagtgcaggaaactcaggttgtcatccaagacaccgaaaagattgattccttgacaaca
gaggtgcaagaacttaagatctcattacaatcagaaaaacagagagctgatgatttagag
aagaaatgctctgaagaagaacgagcaaatgaagaaaagcaaaagagactagaagagact
gaaataaaaatgcgccaatttcaggactacctgagaaggctagaggagaaactcgctaat
gtcgaatctgaaaataaagtactccgtcagcaagctgtctcaatggctccaagcaaaatt
ctatctggccgctccaagtccaatttacaaaggagttctgaaaatgttcaagtatcaagc
aatgatccaaaaataattctagagtccaataatacgtcctctccgaaaaaggaatatgac
attgatgacaagccacaaaaatctcttaatgagaagcaacaggaaaaccaagatctatta
attaggtgcatcgctcagcatttaggctatgctgggaaccggccagttgctgcttgtata
atatacaaatgccttcttcattggagatcatttgaagtagagcggacaagtgtttttgat
cgcatcattcaaaccataggacatgcaattgagacacaagacaacaatgaagttttagca
tattggctttcaaatgcttcaacactattgttattgcttcaaaggacattaaaggctagt
ggatcaaccggtatggctccacagcgtcgacgatcgtcatctgctacactttttggacga
atgacacagagcttcagaggaactccacagggtgtaaatctttctctcataaatggaagc
atggttagtggagttgagacactgagacaagttgaagccaagtatcccgctttactgttt
aaacaacagcttacagcatatgtggagaagatatatggaatgattcgggataatttgaag
aaagagatttctcccttgcttggtttgtgtattcaggccccaaggacatcaagggcaagc
ttaatgaaaggatcttcacgttcaaacaccaatactgctgcccaacaagctttaattgct
cactggcaagggattgtgaagagcctaggaaatttcttgaacatactgaaagtgaacaat
gttcctcctttcttggtccgaaaagtattcactcaaatattctcatttattaacgtacaa
ctatttaacagtttgctattgcgaagggagtgctgttcattcagtaatggcgaatatgta
aaagcgggattagctgaacttgaacattggtgctatagggctactgatgagtatgcaggt
tcagcttgggatgagcttaaacatattagacaagctattggtttcctggtaattcatcaa
aagccaaaaaaaacactggatgaaataagtcacgacctttgtccggtgcttagtatacaa
caactatacagaattagtactatgtactgggatgacaagtatggaacacatagtgtctcg
ccagaggttatatcaaacatgagagtgttaatgacagaagattccaacaatcctgtaagc
aattcatttctgctagatgatgactcaagtataccattctccgtcgatgacatatccaaa
tccatgcaacagattgacatatctgacattgagccacctccattgatacgggagaactcg
ggctttgtattcttgttgccaccacctgaatag
DBGET
integrated database retrieval system
