Panicum virgatum (switchgrass): 120679363
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Entry
120679363 CDS
T07260
Name
(RefSeq) activating signal cointegrator 1-like
KO
K23398
activating signal cointegrator 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120679363
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
120679363
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRIP4_3rd
zf-C2HC5
Motif
Other DBs
NCBI-GeneID:
120679363
NCBI-ProteinID:
XP_039816878
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Position
2K:complement(44515471..44518550)
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AA seq
418 aa
AA seq
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MAAAMATPASTSGEWLKGALQDLRESKGSELELDADLISGLVSFCELASPPDAASYLENF
IGKEAAQHIIQEYLRRRGHIGSLNETESLQSSSLQPYVKPSADVATTQTKKQMRAQKEAA
SSSSQSSKSQAETAESQLASKRGSKKKGAKAISLAEAAKGSIVFKQGKPCSCQARQHNLV
SNCLSCGKIVCEQEGDGPCSFCGALVLKEGSTYAGLSDVGLPLSEAEAAAEAYAKRLVDY
DRNAAARTKVYDDQSDYFEMEGNSWLSSKEKSVLQKQQEEAQEAAANQKGKVVVTFDLVG
RKVILNKDGATELETEHPIMRPPDQKDQSHRIQPNPTIREQPVYVETGPVKPKTDRAKQS
KRLAKNGLCLEVTDRLQHDDKDLQSILSGKVKKGDHLAYSSFGQAREGDDVECSQDFD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgatggcgacgccggcgagcacgtccggggagtggctcaagggcgcccta
caggatcttcgggagagtaaggggagcgagctggagctcgacgctgatctcatctcgggc
ctcgtctccttctgcgagctcgcatctccccccgacgccgccagctacctcgagaacttt
attggaaaagaagctgctcagcacattattcaggagtacttgcggaggaggggtcacatt
ggttccttgaatgaaactgaaagcttgcaatcatctagtcttcagccttacgttaagcca
tctgctgatgtggcaactacacaaacaaagaaacaaatgcgcgcacaaaaagaagcagcg
tcttcttctagtcagagttccaagagtcaagcagaaactgcagaatcccaacttgcttcc
aagagaggttcaaaaaagaaaggggcaaaggccatttctctcgctgaagcagcaaagggt
tccattgtcttcaagcaggggaaaccttgttcgtgccaagcacggcagcataaccttgtt
agcaactgcttatcatgtggcaaaattgtgtgcgaacaagagggcgacggaccctgtagt
ttctgtggtgcgctggtcttgaaggaaggtagtacatatgctggtttaagtgatgttgga
ctacctctttcagaagcagaagctgcagctgaagcatatgcaaagaggcttgttgactat
gacaggaatgctgctgcaaggactaaagtttatgacgaccaaagtgactattttgaaatg
gaaggaaacagttggctctcttcaaaggaaaagtcagtcctacagaagcagcaagaggaa
gctcaggaagcagctgcaaatcaaaaggggaaagtggttgttacatttgatttggtgggt
cgtaaggtgattttgaacaaggatggagccactgagctggaaacggagcacccgatcatg
agaccacctgatcagaaggatcagagccaccgcatacagcccaaccccacaatcagagag
caacctgtgtacgtcgaaacaggtccagtgaagccaaaaactgaccgagcaaaacagagc
aagagacttgccaagaatggtctgtgcctggaggtaaccgacaggctgcagcacgatgac
aaggacctgcagagcattctgagtggcaaggtgaagaaaggcgatcacttggcttacagt
tcctttggtcaggcacgcgaaggggatgacgtcgaatgctcccaagattttgattga
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