Panicum virgatum (switchgrass): 120679377
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Entry
120679377 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 21-like
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120679377
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120679377
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120679377
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120679377
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120679377
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
PK_Tyr_Ser-Thr
EF-hand_8
Kdo
EF-hand_9
APH
Kinase-like
EH
SPARC_Ca_bdg
Pkinase_fungal
FCaBP_EF-hand
PADR1_N
Ned1_M
Motif
Other DBs
NCBI-GeneID:
120679377
NCBI-ProteinID:
XP_039816891
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All DBs
Position
6N:complement(51013190..51015417)
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AA seq
561 aa
AA seq
DB search
MGGCYSAYACSRKLRGQISFVLPVPERDRDDRSSSDGGASTSTSTASPSPSPRADAAAPA
VARTTAAEFARRYVLGRELGRGEFGVTRRCRDAATGEALACKTIRRPRRRAPPRRPAANA
QGQGAQDRTAAAHAADVQREVAIMRRMSARGGAAVVRLREACCEDAAAGGAVHLVMELCE
GGELFDRIVARGHYSERAAANIFRTVVDVVQLCHSNGVIHRDLKPENFLFANKSEDSPLK
VIDFGLSVFFNPGDRFTEVVGSAYYMAPEVLKRSYGPEVDIWSAGVMLYILLCGVPPFWG
DNDEKIAQAILRGGIDFNREPWPRVSGNAKDLVRRMLDPDPSTRLTARQVLEHPWLRDAD
AAPNVSLGDAVRARLQQFSAMNKFKKKALGVVARNLPVEELDKYVQMFRLMDKDQNGNLS
LEELMDGLHINGQPVPESEIRMLMEAADTDGNGTLDCDEFVAVSLHLKKMTNDQYLASAF
SYFDKDGSGFIELEELMEELGPNDQVILDIIRDVDTDQDGRISYQEFELMMKAGTDWRNG
SRQYSRANFNSLSRKLCKDMS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggggggctgctactccgcctacgcctgctcgcggaagctgcgcgggcagatctccttc
gtgctccccgtccccgagcgcgaccgcgacgaccgctccagcagcgacggcggcgccagc
accagcaccagcacggcctccccgtccccgtccccgcgcgcggacgccgccgcgcccgcc
gtggcccgcaccaccgcggccgagttcgccaggcgctacgtgctgggccgggagctgggc
cgcggcgagttcggggtgacgcgccggtgccgggacgccgccacgggggaggcgctcgcg
tgcaagaccatccggaggccccgccgccgcgcccccccgcgccgccccgcggccaacgcc
cagggccagggcgcgcaggacaggacggcggcggcgcacgcggccgacgtgcagcgcgag
gtggccatcatgcgccgcatgtcggcgcgcggcggcgccgccgtggtgcggctccgcgag
gcctgctgcgaggacgccgcggcgggcggcgccgtgcacctcgtcatggagctctgcgag
ggcggcgagctcttcgaccgcatcgtcgcgcgcgggcactactccgagcgcgccgccgca
aacatcttccgcactgtcgtcgacgtcgtccagctgtgccattccaacggggtgatccac
agggacctcaagccggagaacttcctgttcgccaacaaatccgaggactccccgctcaag
gtcatcgacttcggcctctccgtcttcttcaaccccggcgatcggttcacggaggtggtg
gggagcgcctactacatggcccccgaggtgctgaagcggagctacgggccggaggtggac
atctggagcgccggcgtcatgctctacatcctcctctgcggcgtcccgcccttctgggga
gacaacgacgagaagatcgcgcaggcgatcctccgcggcggcatcgacttcaaccgggag
ccgtggccgcgggtgtccggcaacgccaaggacctggtccggaggatgctcgacccggac
ccctccacccggctcacggcgaggcaggtcctggagcacccgtggctcagggacgcggac
gcggcgcccaacgtgtcgctgggcgacgccgtgcgggcgcggctgcagcagttctccgcc
atgaacaagttcaagaagaaggcgctgggcgtggtggcgcgcaacctgccggtggaggag
ctggacaagtacgtgcagatgttccggctcatggacaaggaccagaacggcaacctgtcg
ctggaggagctcatggacggcctccacatcaacggccagccggtgcccgagtcggagatc
cggatgctcatggaggcggcggacacggacggcaacgggacgctcgactgcgacgagttc
gtggcggtgtcgctgcacctcaagaagatgaccaacgaccagtacctggcgtcggccttc
agctacttcgacaaggacggcagcggcttcatcgagctggaggagctcatggaggagctg
gggcccaacgaccaggtcatcctcgacatcatccgcgacgtcgacaccgaccaggacgga
cgcatcagctaccaggagttcgagctcatgatgaaggccggcacggactggaggaacggc
tcgcgccagtactccagggccaacttcaacagcctcagccggaagctctgcaaggacatg
tcgtga
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